Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03550 ATGGAGAGTGGACCCAATATTATTATGGATATGAACAAAGATAAAGTgatttcaaattctcaattgATTTCTTCATCTTTAAAAGGGTTTAAGGACAAGATCATCACCAACAACAACATGCCTTCCTGGCTTCTCACCAACATTTCTGATTTGGAAGAGAGGATGAAAATGTTGGCTATTGGAacaaatgaagatgaagaagaaggtgaCACTTTTGCAGAAAGAGCAGAAGCTTATTACCAAAAAAGACCTCAACTACTTTCACTTTTGCAAGATTTGTATAATGGCTATATAACTTTATCAGATCGTTATACACAAACACTTGCAAAACATAAGCATCATAGTAGACACTCTTCTCAAGTTTCAACTTTGGAGGATGGTTTCTATGACCAAGAAGAAGTTATTAGTGGTGTGAGTCAAGTTGATTCGGATATCGAAAGTTCAATCTCTTATCAACAAATGTTGCCTTTGATGAAAGGAAATTTAAATTTGCTTGATGTTGATGCAATTGTAGCTGAGCTTGTTATGAAGAATGTTATGTGTGATTTCTTGGTTCATGAGGTTGGTGTTATGGAGAAGAAATATTGCGAGTCTTCGAGGAAAAGTGAGTTGCAAAAGAGTTTACTTGAGGTTTTGGAATCTGAGAGACTTGTCTTGTTGAATGAGAATGCTGGTTTGAGTTATAGAGTTAATACTTTAGTTGAAGAGAACAAAGAACTTGCGTCCGAGTCGGTTTTCATCAAGAGAAAAGCCGGTGAGTTAGCTAAATGTGTGTTGAAGATGAGAGAAGATCATAGAGTTTATCTTTTGCATAGGAAAATTGAAGATCTTCAAGGACAGATACATGGTTTAGAGAAGAGGAATAAGGAGTATTATGAGAGGCTTTTGAGAAGAGAGAATCAAGAAAATGGTGGATGTATGGGGAACAAAGGGAAGAATGGCGGCGAAGGGATAGCTTTGGAAGTTCATGTTCAAATGGAGAAGCCTAGAAGGTTTAAGTGGAAAGAAGAAGGAAATTCTTCTAGGAAGAATTTTGATGGAAAGAAAAAAGGTCATAGCTTGTGGAAAAAGTTGAAGAACATGGACTTGTTGCTTTGTGGAACAAATCCAACTTGTGCTTGA 1122 0.3512 MESGPNIIMDMNKDKVISNSQLISSSLKGFKDKIITNNNMPSWLLTNISDLEERMKMLAIGTNEDEEEGDTFAERAEAYYQKRPQLLSLLQDLYNGYITLSDRYTQTLAKHKHHSRHSSQVSTLEDGFYDQEEVISGVSQVDSDIESSISYQQMLPLMKGNLNLLDVDAIVAELVMKNVMCDFLVHEVGVMEKKYCESSRKSELQKSLLEVLESERLVLLNENAGLSYRVNTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYLLHRKIEDLQGQIHGLEKRNKEYYERLLRRENQENGGCMGNKGKNGGEGIALEVHVQMEKPRRFKWKEEGNSSRKNFDGKKKGHSLWKKLKNMDLLLCGTNPTCA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03550 373 Pfam KIP1-like protein 39 104 IPR011684 GO:0003779
Tsu06g03550 373 PANTHER PROTEIN NETWORKED 4A 33 371 - -
Tsu06g03550 373 Coils Coil 274 294 - -
Tsu06g03550 373 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 23 111 IPR011684 GO:0003779
Tsu06g03550 373 PANTHER KINASE-INTERACTING FAMILY PROTEIN 33 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03550 Tsu-Chr6 46696133 46702515 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03550 - - mtr:MTR_6g081040 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03550 06 46696133 46702515 Tsu06g03550 06 46696133 46702515 ECH