Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03526 atggcTGTAACCACATCAACACCAACATCACCACCATCAATGGCACAAGATCTACTCAATTCCCTtcccaaaaccctaaaactcaaaacaaaacaacaagagCTTCTAATTCGTGTCGCAACTCTCGGTTTAATCTACATCCTCGCATTCATCACTCGTCTCTTCAGTGTTCTTCGTTACGAATCTATGATCCATGAATTCGATCCATATTTCAACTACCGAACAACGCTTTACCTCACAGAACACGGTTTTTCCGAGTTTTGGAACTGGTTTGACTCAGATTCATGGTATCCACTCGGTAGAATCATCGGCGGTACACTTTATCCCGGTCTTATGCTCACAGCCGCCGCGTTATACAAAATCCTCCATTTCCTTCGATTCGCCGTTCACATCCGTGAAGTCTGTGTCCTAACGGCACCATTTTTCGCGTCGAATACCGCGATTGTTGCTTACTTCTTTGGGAAAGAAGTTTGGGATTCCGGTGCGGGGATTGTTGCGGCGGCTTTGATTGCGATTTGTCCTGGTTACATTTCTAGATCGGTTGCTGGATCTTATGATAATGAAGGAGTTGCGATTTTTGCATTGTTGTTGACTTTTTATCTGTTTGTTAAAGCGGTTAATACCGGATCATTATCGTGGTCTTTGGCGTCGGCTTTTGGTTATTTCTATATGGTTTCAGCCTGGGGTGGTTATGTGTTTATTATCAATTTGGTGCCACTTTATGTGTTGGTGTTGTTGGTAACTGGAAGATATTCATTGAGACTTTATGTTGCTTataattgtatgtatgtattggGAATGTTGCTTGCTATGCAGATTAGGTTTGTTGGGTTTCAACATGTTCAATCTGGAGAACATATGGCTGCTATGGGTGTCTTTTTCTTGCTTCAGgtgtttttctttttggacTGGGTAAAGCATTTGCTTGGagatgtaaaattgtttcaAGCATTTTTGAGGATCACTGTAACTGGTGCAGTTAGTGTTGGTGCCATTGCCTTGGGAGTAGGCATGGCATCTGGTTACATATCACCATGGACCGGAAGGTTTTATTCCTTGCTCGATCCAACATATGCTAAGGATCACATTCCAATTATTGCGTCTGTCTCTGAGCATCAGCCTACTGCTTGGTCATCCTTCATGTTTGATTTCCATATATTGCTGTTCCTTTTCCCTGCCGGGCTCTATTTTTGCTTCAAGCGTTTATCAGATGCCACAATCTTTGTAGTTATGTATGGTCTTACAAGCATGTACTTTGCTGGTGTTATGGTTCGATTAATTCTTGTTGCTACGCCCGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACTCGGGTTGTGAGGGCAAAAGTCCAAACCTTACAAAGTGGTTCTGGTAAAGGAACTAGTGCTTCAAAAGGTTCTTCTAAGGGTGTAATTGATAACTCCCAGCCTTTCCAAAAGAACGGTGCTATGTTGTTACTTCTCGGTGCCTTTTATCTGCTCAGTAGATATGCTATTCACTGTACTTGGGTTACATCTGAGGCATACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCACGGCCAGAGGGTCATCTTTGACGATTATCGTGAGGCTTACTTTTGGCTTCGCCAGAACACTCCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCATCGTATGAGGATGAGGCTTATGACATAATGAAATCGCTTGATGTTGACTATGTTTTAGTCGTGTTTGGAGGTGTTACCGGTTATTCCTCTGACGATATTAATAAGTACGCCCGTCTTAAGTTATATATTGTCCTTTTACATTCATTATTTGTACTTAATGCATGTTTCCATTTCTTTATGACAAATGCTATATAG 1974 0.4053 MAVTTSTPTSPPSMAQDLLNSLPKTLKLKTKQQELLIRVATLGLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTEHGFSEFWNWFDSDSWYPLGRIIGGTLYPGLMLTAAALYKILHFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLSWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKHLLGDVKLFQAFLRITVTGAVSVGAIALGVGMASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFVVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKVQTLQSGSGKGTSASKGSSKGVIDNSQPFQKNGAMLLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMKSLDVDYVLVVFGGVTGYSSDDINKYARLKLYIVLLHSLFVLNACFHFFMTNAI 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03526 657 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 22 631 IPR003674 GO:0004576|GO:0006486|GO:0016020
Tsu06g03526 657 Gene3D - 534 637 - -
Tsu06g03526 657 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 22 631 - -
Tsu06g03526 657 Pfam Oligosaccharyl transferase STT3 subunit 39 517 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03526 Tsu-Chr6 46403317 46407073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03526 6 629 Miscellaneous Gene Families AT1G34130 84.261 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03526 K07151 - gmx:100780916 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03526 06 46403317 46407073 Tsu06g03526 06 46403317 46407073 ECH