Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03523 ATGGCACTGACTAACGCTACAGTGATCGGTCCTTCTCTCTATGTCGTTGCTCGCATCACGAAGGTTCCATTTCTAGGTTCAAATGGCGAAATTAGTTCTGGATTTTGTAGTTCTGCTTTTTGCGTTGGGTCCCATTCGGGGAAAAGTGATGTTGTTCTTGAAAGAAGAAAGTTGAAAtctgttaataataataataatagtaacggCATTGTTGAAAATGTTCAGTTGAAATCCACTGTTGAAATCCCAGTTTCTTGTTATCAGCTTATTGGTGTTCCTGATCGTGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTAAAAAATGCAGAAATTGATGAAGGTTACACAGTGGGTGTTGTTGCATCTCGCCAGGATCTTCTGATGGATGTTAGGGATAAACTCCTTTTTGAGCCAGAATATGCTGGTAACCTGAAGGAAAAGATTCCCCCTAAATCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCGGGTGCTCTGTGCCTTCTTCAAGAGATTGGAGAATCAAAATTTGTAATGGACATTGGAAGAACAAGTCTTCAGCATCAAGATGCGAAGCCATATGCAGATGATTTAGTTCTTTCTATGGCACTAGCTGAGTGTACAGTTGCGAAGATTGGctttgagaagaagaaagtatCTCAAGGTTTCGAAGCTCTTGCCCGTGCTCAATGTCTTCTAAGAAGTAAACCGTCTCTTGCAAAAATGACACTTCTATCTCAGATTGAAGAATCTCTTGAAGAACTTGCACCTGCTTGCACCTTGGAGCTACTGAGCATGCCAAATACCCCTGAAAATGTTGAACGAAGACGGGGAGCAATTGCGGCTTTACGTGAATTACTTAGACAGGGTCTTGATGTTGAAGTTTCATGTCAAGTGCAGGACTGGCATTCTTATCTAAGCCAAGCGTTTAGCAATTTACTGGCTAATGAGATAGTTGATCTTCTTCCTTGGGATAGCTTAGCCGTGATGCGGAAGAATAAGAAGACCATTGAATCACAGAATCTAAGGGTAGTAATTGATTCAACCTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGATTTTCCAGCAAGCAAAAAGAGTTGATTAACAAGGCAAAAATCATATGTGAATGTTTGATAACTTCAGAGGGCATTGATCTGAAATTTGAAGAAGCTTTTTGCCTATTCCTTCTTGGACTgGGCACAGAGGCTGAGGCAATTGAAAAGCTGAAGCAGCTTGAGCTAAACTCAAatccaaaacataattcaatCTTGGGGAAGGCAATAATGAATGCTTCAGCTGCAAACCCATCATTGGAATTGTGGCTTAAGGATTCCGTGCTTGACTTATATCCAGATACTAAAGGTTGTTCTCCTGCTTTGGCCAATTTCTTTAATGCTCAAAAGAAATTTTCTGGAAGCAAGAATTCTAAAGGATCTTCACAAATGTTTCCGACTATATGTCATAGACCTCTATCATCATCAGGTTCTGTAGAACGGAAAGATTTTGAGGAACCTCGCTCATATATGAGCTCTTCCCCAAATTTGGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCAGGGTTCCCTGCTATCtggtaaaaatgaaaatggaagCAATCCTAGTGAGCCACCTGTTAAAGTGAACAGGAACCTTGGCACGTATCACAATGGTATTTGGAATAATCACTTTATTCCTGCTCAATTATTTGAAAGAATAACACACGTTACCATCTTGGGTTGTATTGCATTTGCTTCAATGAAGTTGTTGGGAATGAACCTGGGCAAGAATTTTACTGGTTCTAACTGGGCTTCCACAAAAGCTCACAATAGCACTTCTTGGACTGCAAACTCATCTGTTAACTACAGTGTAGGCCCTACAAATATGAGGCGAAGTTCTATTGCCAACAAACTGAAGAGAATTATGTCAACAGTTAAGTTACAGTTTTTGCCCCAGTCAGATGCTGGAAGTCGAAGTGATTTACACAGTGCTCTTACCTCATCATCTTCCCCTCTTAATGTGTATAGGAGGCTGATGCCTGTGGAAGAAGCAGAAACCCTTATTAGGGAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTAAATGGCCTAGCTCAAGTCCTTGACGAATCTATGCTTGCTCAGTGGCAAGCCTTGGCTGAtgctgcaaaagaaaaatcttgtCACTGGAGATTTCTTTTGCTAAAATTATCTGTCCTTAGAGCTGACATTCTATCAGATGGAAATGGATCAGATATAGCAGAAATAGAAGCCCTTTTAGAAGAAGCAGCTGAACTTGTTGACAGTTCTCAGCAAAAGAACCCAAACTACTATAGCACGTACAAAGTTCAGTATGTTGTGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGCTGATATTCAAACATGA 2442 0.3935 MALTNATVIGPSLYVVARITKVPFLGSNGEISSGFCSSAFCVGSHSGKSDVVLERRKLKSVNNNNNSNGIVENVQLKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGYTVGVVASRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEIGESKFVMDIGRTSLQHQDAKPYADDLVLSMALAECTVAKIGFEKKKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSMPNTPENVERRRGAIAALRELLRQGLDVEVSCQVQDWHSYLSQAFSNLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVVIDSTCFYRVFTAHMALGFSSKQKELINKAKIICECLITSEGIDLKFEEAFCLFLLGLGTEAEAIEKLKQLELNSNPKHNSILGKAIMNASAANPSLELWLKDSVLDLYPDTKGCSPALANFFNAQKKFSGSKNSKGSSQMFPTICHRPLSSSGSVERKDFEEPRSYMSSSPNLGFAVKQLTPTDLQGSLLSGKNENGSNPSEPPVKVNRNLGTYHNGIWNNHFIPAQLFERITHVTILGCIAFASMKLLGMNLGKNFTGSNWASTKAHNSTSWTANSSVNYSVGPTNMRRSSIANKLKRIMSTVKLQFLPQSDAGSRSDLHSALTSSSSPLNVYRRLMPVEEAETLIREWQTIKAEALGPSHEVNGLAQVLDESMLAQWQALADAAKEKSCHWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELVDSSQQKNPNYYSTYKVQYVVKRQDDGSWKFCEADIQT 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03523 813 Pfam ARC6-like, IMS domain 689 806 IPR025344 -
Tsu06g03523 813 Coils Coil 762 782 - -
Tsu06g03523 813 MobiDBLite consensus disorder prediction 532 551 - -
Tsu06g03523 813 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 50 812 IPR044685 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03523 Tsu-Chr6 46352642 46359568 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03523 - - lja:Lj2g3v0609710.1 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03523 06 46352642 46359568 Tsu06g03523 06 46352642 46359568 ECH