Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03512 ATGGCACAAAATGAGAATGAGGATAGAGTAGTTAACAATGGTTTTGAAGTTGAACAACATGTTGATgatgaacaacaacaaaaattggaACAACAAAAGGGTAGTACAAGGTtattgaaagaagaagaagcttcTGTTGAGAAAGTGTTTAAGCACTTATTGGTTCCATCATGGAGGAATCAATTAACAGTTAGAGCATTTTTTGTCAGCTTTTTTCTCAGCATACTTTTCAGTTTCATTGTCATGAAACTTAATCTCACTACTGGGATTATTCCATCACTTAACGTCTCTGCTGGTCTTTTGGGATTCTTCTTTGTCAAAACTTGGACAAAGTTTTTGGAAAAATCTGATATGTTGAGACAACCTTTTACAAGACAAGAGAATACTGTTATTCAGACTTGTGTTGTTGCTTCCTCTGGAATTGCTTTTAGTGGTGGATTTGGAAGTTACCTCTTTGGAATGAGTAAACATGTAGCTGATCAATCCCAAGACACCAGTGATTTTAAGGATCCAAGTTTGGTATGGATAATTGCTTTTCTCTTTGTTGTTAGCTTTTTGGGACTCTTCTCAGTTGTACCTCTTAGAAAGATTATGGTTATTGACTTCAAATTGACTTATCCAAGTGGTACTGCAACTGCTCATCTCATCAACAGCTTCCACACTCCTCAAGGAGCCAAACTAGCAAAGAAGCAAGTGAAGTTGTTGGGAAAATTCTTCAGTTTGAGTTTCTTATGGGGTTTCTTTCAATGGTTCTATACAGCCTCTGATGGGTGTGGATTTCAAGCCTTCCCTTCATTAGGGCTCGAAGCATATGATAACAGGTTTTACTTTGATTTTTCAGCACTCTATATTGGTGTGGGAATGATTTGTCCATATATCATAAATATATCAGTGCTCCTTGGAGGAATTCTTTCTTGGGGACTAATGTGGCCTCTTATAAAAACCAGAGAGGGTCATTGGTACAAAGCAGGCCTCGGTGAATCCAGCCTTGAAGGAATCCAAGGTTATAGGGTATTTATAGCCATAGCAATGATCCTTGGAGATGGTTTATACAACTTTGTTAAGGTACTGTCTCATACCTTATTGGGTTTGTATAATCAAATTGGAAACAAACGAAGGGCAGGCACTCTACCTGTTGCAGATCAAGACTCTTCCTCAAGTCCTGAGCTATCTTACGACGATCAGCGCCGAAAGGCGCTCTTTCTTAAAGATCAAATTCCTACATGGTTTGCAATTGCAGGATATGTTGCTATTGCTGCAGTCTCTACAGCAACTTTGCCACACATCTTCCATCAACTAAAATGGTATTACATACTTGTTATATACCTAATTGCTCCAACCTTAGCATTTTGCAATGCTTATGGTTGTGGACTAACAGATTGGTCCCTAGCATCAACCTACGGAAAACTAGCCATCTTTACAATCGGTGCGTGGGCCGGTGCATCACATGGTGGAGTTCTAGCTAGTCTAGCAGCCTGTGGAGTTATGATGAACATAGTTTCAACAGCTTCTGATTTAATGCAAGATTTTAAAACCGGTTACCTTACCCTGGCTTCGCCGCGATCCATGTTTGTGAGCCAAATAATCGGCACAGCAATGGGATGTGTTATTTCTCCTTGTGTGTTTTGGATTTTCTACAAAGCATTTCCTGACCTAGGTGAACGTAAAAGTCAATACCCTGCACCGTATGCCATTGTGTACCGCAACATGGCGATACTTGGAGTACAAGGATTTGATTCTTTACCAGATAATTGTCTCAAGCTTTGTTATATATTCTTTGCCGCGGCGATTGCAGTAAATTTGATTAAGGATTTGGTTGGTAAGGTAGGGAGATTCATACCACTTCCAATGGCTATGGCAATACCTTTCTATTTAGGACCGTACTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTGTTTATTTGGGAAAAGGTTGATAAGACTAAGGCCGATGTGTTTGCACCTGCTGTTGCTTCTGGTTTGATATGCGGTGATGGAATATGGACTTTGCCTGCTTCAATACTTGCTCTTTTTGGAGTTAAGCCACCCATTTGCATGAAGTTCTTGTCAAGGGCTACAAACTCTAGGGTTGATACTTTCTTAGGGAATTAA 2115 0.3901 MAQNENEDRVVNNGFEVEQHVDDEQQQKLEQQKGSTRLLKEEEASVEKVFKHLLVPSWRNQLTVRAFFVSFFLSILFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLEKSDMLRQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSKHVADQSQDTSDFKDPSLVWIIAFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVKLLGKFFSLSFLWGFFQWFYTASDGCGFQAFPSLGLEAYDNRFYFDFSALYIGVGMICPYIINISVLLGGILSWGLMWPLIKTREGHWYKAGLGESSLEGIQGYRVFIAIAMILGDGLYNFVKVLSHTLLGLYNQIGNKRRAGTLPVADQDSSSSPELSYDDQRRKALFLKDQIPTWFAIAGYVAIAAVSTATLPHIFHQLKWYYILVIYLIAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASHGGVLASLAACGVMMNIVSTASDLMQDFKTGYLTLASPRSMFVSQIIGTAMGCVISPCVFWIFYKAFPDLGERKSQYPAPYAIVYRNMAILGVQGFDSLPDNCLKLCYIFFAAAIAVNLIKDLVGKVGRFIPLPMAMAIPFYLGPYFAIDMCVGSLILFIWEKVDKTKADVFAPAVASGLICGDGIWTLPASILALFGVKPPICMKFLSRATNSRVDTFLGN 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03512 704 MobiDBLite consensus disorder prediction 11 26 - -
Tsu06g03512 704 Pfam OPT oligopeptide transporter protein 61 676 IPR004813 GO:0035673
Tsu06g03512 704 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 29 703 - -
Tsu06g03512 704 MobiDBLite consensus disorder prediction 1 26 - -
Tsu06g03512 704 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 29 703 IPR045035 GO:0035673
Tsu06g03512 704 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 60 677 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03512 Tsu-Chr6 46271218 46277373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03512 - - mtr:MTR_6g077870 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03512 06 46271218 46277373 Tsu06g03512 06 46271218 46277373 ECH