Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03443 ATGGTGATGTTGGATTCACAACATCATGAATgtttcaatttcatgtttttcttcttcttagttgttgttgttgggtcAGTTAATGGAGTTGCAGTGCCTGATACTGGAGGGTTGAGTAGAGAAGTGTTTCCTAAAGGGTTTGTGTTTGGTGTTGCAACTTCTGCTTATCAAGTTGAGGGTATGGCCCACAAAGATGGTAGGGGTCCTAGTATTTGGGATGTTTTCATCAAAAAACCTGGGATTGTTGCAAATAATGGCACAGGAGATGTTTCTGTTGATCAATATCATCGCTACAAAGAAGATATAGATCTCATGGCAAAGCTAAATTTTGATGCTTACCGGTTCTCAATCTCATGGTCCAGAATATTTCCAAATGGAACTGGCAAAGTAAATTGGAAAGGTGTAGCATACTACAACAGGTTGATTGATTACATGCTAGAAAAAgGCATTACTCCTTATGCAAATCTCTATCATTATGACCTTCCTTTAGCTCTTGAGTTGAAGTACAACGGGTTATTGAGCCGTAATGTTGTGAAAGACTTTGCGGATTATGCAGATTTCTGTTTCAAGACATTTGGAGACAGAGTTAAGAACTGGATGACCTTTAATGAACCAAGAGTTGTTGCTGCTCTTGGTTATGATAATGGCTTTTTTGCCCCTGGAAGATGTTCAAAAGAATATGGAAATTGTACAGCTGGAAATTCAGGAACTGAGCCTTATATTGTAGCTCACAATTTGATTTTGTCACATGCCTCTGCTGTTCAAAGATATAGAGAGAAGTACCAAGAAAAGCAAAAGGGTAGGATTGGAATTTTGTTAGATTTTGTTTGGTATGAGCCTCTTACAAGATCAAAGGCTGATAACTACGCTGCTCAAAGAGCTAGAGACTTTCATATTGGATGGTTCATTCATCCCATTGTTTATGGTGAGTATCCAAGAACTTTGCAAAATATTGTTGGGAATAGACTCCCAAAGTTCACTAAGGAAGAAGTGAAAATTGTGAAAGGATCCATTGATTTTGTTGGTATCAATCAATATACTACATACTACATGTATGATCCTCATCAATCAAAACCAAAGGTTCCTGGCTATCAAATGGATTGGAATGCAGGGTTTGCTTATGCTAAGAATGGAGTACCTATTGGACCAAGgGCATATTCATATTGGCTTTACAATGTACCATGGGGTTTGTACAAATCATTAATCTACATCAAGGAGCATTATGGAAATCCAACTGTGATCTTATCTGAAAATGGCATGGATGATCCTGGTAATGTAACATTTGCCAAGGGATTGCATGACACCACAAGAATAAACTATTACAAAGGCTATTTAACTCAACTAAAGAAAGCTATTGATGATGGAGCAAATGTGGTTGGATACCATGCATGGTCTTTGCTTGATAACTTTGAATGGAGATTAGGGTACACATCAAGGTTTGGTATTGTCTATGTTGACTTCAAGACTCTTAAGAGAACCCCTAAGATGTCAGCATATTGGTTCAAGCAACTACTCACCAAAAAGAAGTAG 1530 0.3667 MVMLDSQHHECFNFMFFFFLVVVVGSVNGVAVPDTGGLSREVFPKGFVFGVATSAYQVEGMAHKDGRGPSIWDVFIKKPGIVANNGTGDVSVDQYHRYKEDIDLMAKLNFDAYRFSISWSRIFPNGTGKVNWKGVAYYNRLIDYMLEKGITPYANLYHYDLPLALELKYNGLLSRNVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKEYGNCTAGNSGTEPYIVAHNLILSHASAVQRYREKYQEKQKGRIGILLDFVWYEPLTRSKADNYAAQRARDFHIGWFIHPIVYGEYPRTLQNIVGNRLPKFTKEEVKIVKGSIDFVGINQYTTYYMYDPHQSKPKVPGYQMDWNAGFAYAKNGVPIGPRAYSYWLYNVPWGLYKSLIYIKEHYGNPTVILSENGMDDPGNVTFAKGLHDTTRINYYKGYLTQLKKAIDDGANVVGYHAWSLLDNFEWRLGYTSRFGIVYVDFKTLKRTPKMSAYWFKQLLTKKK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03443 509 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 PRINTS Glycosyl hydrolase family 1 signature 413 421 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 PRINTS Glycosyl hydrolase family 1 signature 434 445 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 PRINTS Glycosyl hydrolase family 1 signature 455 472 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 PRINTS Glycosyl hydrolase family 1 signature 479 491 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 Pfam Glycosyl hydrolase family 1 40 508 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 Gene3D Glycosidases 27 509 - -
Tsu06g03443 509 PANTHER BETA-GLUCOSIDASE 44 30 506 - -
Tsu06g03443 509 Coils Coil 507 509 - -
Tsu06g03443 509 PANTHER GLYCOSYL HYDROLASE 30 506 IPR001360 GO:0004553|GO:0005975
Tsu06g03443 509 SUPERFAMILY (Trans)glycosidases 37 506 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03443 Tsu-Chr6 45417687 45426024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03443 35 507 Glycoside Hydrolase AT3G18080 81.857 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03443 K05350 - gmx:100814740 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03443 06 45417687 45426024 Tsu06g03443 06 45417687 45426024 ECH