Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03317 atgggGAATACGTTCTGTTTATTCTGTGGATGTGTTGAACAATCAAGCGTTGGTATTGTTGAACAGTGGGGTCGTTTTCATAGAGTTGCTCAACCTGGTTTTCAATTCTTTAACCCTTTCGTCGGTGAATGTCTTGCTGGTATTCTCTCCACCCGTATCTCTTCCCTCGATGTCAAAATCGAAACCAAAACCAAGGACAACGTGTTTGTGCAGTTGATATGTTCAATTCAATACCGTGTGGTTAAGGAAAATGCTGATGATGCTTTCTATGAGTTGCAAAACCCGCAGGAACAGATCCAGGCTTATGTTTTTGATGtgGCCCGTGCTATTGTTCCGAGGATGAATTTGGATGAGCTGTTTGAGCAAAAAGGTGAGGTTGCCAAAGGTGTCATGGAAGAACTTGGAAAGGTGATGGGAGAATATGGATATAGCATAGAACACATACTAATGGTTGACATTATACCTGATCCTTCTGTACGCAGGGCAATGAATGAGATCAATGCAGCTCAAAGGCTTCTACTTGCTAGTGAATTCAAAGGAGAAGCTGACAAGGTGCTTATAGTTAAAAAGGCAGAAGCAGAAGCCGAATCAAAGTATTTAGGCGGGGTTGGTGTGGCAAGACAGAGGCAAGCTATCACAGATGGATTGAGAGAGAATATCTTGCATTTCTCTAACAAGGTATCAGGAACTTCAGCAAAGGAAGTGATGGATCTTATCATGATTACTCAGTACTTTGACACAATCAGAGACCTTGGAAACTCTTCAAAGAATACCACAGTTTTTATACCACATGGACCTGGCCATGTTAGGGATATCAGTAGTCAAATACGCGATGGAATGATGGCAGCATCATGTGCTCAAGTTACTGATGTTGagtga 879 0.4141 MGNTFCLFCGCVEQSSVGIVEQWGRFHRVAQPGFQFFNPFVGECLAGILSTRISSLDVKIETKTKDNVFVQLICSIQYRVVKENADDAFYELQNPQEQIQAYVFDVARAIVPRMNLDELFEQKGEVAKGVMEELGKVMGEYGYSIEHILMVDIIPDPSVRRAMNEINAAQRLLLASEFKGEADKVLIVKKAEAEAESKYLGGVGVARQRQAITDGLRENILHFSNKVSGTSAKEVMDLIMITQYFDTIRDLGNSSKNTTVFIPHGPGHVRDISSQIRDGMMAASCAQVTDVE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03317 292 Pfam SPFH domain / Band 7 family 12 179 IPR001107 -
Tsu06g03317 292 Gene3D Band 7 domain 38 169 IPR036013 -
Tsu06g03317 292 CDD SPFH_like_u4 11 280 - -
Tsu06g03317 292 SMART PHB_4 7 167 IPR001107 -
Tsu06g03317 292 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 288 - -
Tsu06g03317 292 SUPERFAMILY Band 7/SPFH domain 39 171 IPR036013 -
Tsu06g03317 292 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03317 Tsu-Chr6 44103051 44107260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03317 - - gmx:100788194 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03317 06 44103051 44107260 Tsu06g03317 06 44103051 44107260 ECH