Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03313 ATGTCCATAAACGAATCCCAAACTCATCACAACAATGTTGAAACCAAAACCACCTTCACAACACCAATTTCTTCAAAAACCCATCCAATTTTGACCCTTCAATTAAAAGAACCACAAGACACAATTTTTCCTACAAATTCAAACACCCTTTTAACCAAAACAATGACTTCAACAAACTCTACTTCAACAGAACCACTTCCTTCTTCAGATGAAATCGCCATTAAAGCTGTTAATAAACGCTATGAAGGTCTTGTTACAGTTAGAACCAAAGCTATTAAAGGTAAAGGTGCTTGGTATTGGAATCATCTTGAACCAATTTTGGTTCGAAATCCTGATTCAGGTGTTCCTAAATCTGTTAAACTTAAGTGTTGTTTATGTGATTCTGTTTTTTCTGCTTCAAATCCTTCAAGAACAGCTTCTGAACATTTAAAGCGTGGAACTTGTTCTAATTTTAACAATTCTGGGTTTAAAAATGAACCCGGTTCAGTTCCTTCACCGGTTCCTATTTCTTCTGTTTCGGGTTCGAACCGGAAAAGAGGTTCACCTCATCAAATTGGTGTTTCTGTTTCAGTTTCAACTTCACCAACATCATTAACTTATCAAAATCATAACTTGGCATTGGTTGAAATTGGGTACCCTCAGGTGCATGGTAATATGGTGAACCATCAGAACCAGAACCAGAACCATCAGAATCATTTGATGTTGTCTGGTGGAAAAGAAGATTTGTGTGCTTTGGCTATGTTTGAAGATAGTGTGAAGAAGTTGAAGAGTCCAAAAACATCACCTGGTGCGTCTTTGAGTAAAGAACAGGTTAATTCTGCTTTGGATTTACTTGCTGATTGGTTTTATGAATGTTGTGGTTCTGTTTCTTTGTCAACACTTGAGCATAGAAAGTTTCAAGCTTTTCTATCTCAGGTTGGTTTACCTGTAGGAAATGGTTTAAGACGCGAAGTTTCCGGTCCAAGGCTCGATGCTAGGTTTAGCGAGGTTAAGAGTGAATCCGAGGCGAAAATTAGGGATGCAATGTTTTTCCAGGTAGCTAGTGATGGTTGGAAgagttataataataatagtaataataatattagtattaatagtaatagtaataatagGAATTGTAATGGTTTGTGTTGTGGTGGTGAGAGTTTGGTTAAGTTTATGGTCAATCTTCCAAATGGGAGTAGTGTTTTTCAAAAGGCGGTGTTTACGGGCGGGGGAGTTGTGAATTCGAAGTATGCTGAAGAGGTTTTATGGGAGACTGTGACTGGTGTTAGTGGAAGTGTTGTTCAAAGATGTGTAGGGATTGTTGCTGATAAGTTTAAGGATAAGGCATTGAGGAATTTGGAGATTCAAAACCATTGGATGGTAAATACTTCTTGTCAGCTTCAAGGGTTTCTTAGTTTAATTAAGGATTTTAATAAAGAGCTCGATCTTTTCGGTGTTGTTACTAAGAATTGTCTCAAAGTTGCAAATTTTGTAGATACTGAGTCTCAGGTGAGGaatgtttttgttaattataGAATGCAGGAGATGGAGTATGCTGGGTTGATTCGAGTCCCTTCGCCGAAATGTGATCCGTTGAAGAATTTTGCGTCTGTGTTTCCGATGCTTGAGGATATTTTGAGCTGTGCTAGAATCATTCAAATGGTTGTAATGGAAGAGGCGTTTAAGGTAATGTTTATGGAGGATCCGCATGCTAGAGAAGTGGCTGGTTTGGTTCGGAATGAGGTGTTTTGGAACGAGCTCGAAGCTGTTTATTCCCTTGTGAAGATTATTAAAGAAATGGTTCAAGATATAGAGGCGGAGAGGCCGTTGATCGGCCGGTGTTTGCCTCTTTGGGAGGAGCTAAGAACCAAAGTGAAAGAATGGTGTGGTAAATACAATGTCGTGGAAGGACCTGTGGAGAAAATACTCGAAAAACGGTTTCGAAAAAACTATCATCCGGCATGGTCAGCGGCGTTTATACTCGACCCACTTTACTTGATCAAAGACACAAGCGGAAAGTATCTTCCACCGTTCAAGTTTTTGACGCGCGAACAAGAGAAAGACGTTGATAAGTTACTTACACGGTTAGCTTCAAGAGAAGAAGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGATCAGAAGGGCTCGACCCTCTTTACGCACAAGCTGTTCAGATGAAACAAAGAGATCCCTTGACCGGTAAGATGAAAGTTGCAAATCCGCTTAGTAGTCGACTTGTTTGGGAAACATGTTTGTGTGAGTATAAATCTTTAGGGAAGATCGCCGTGAGGCTCATTTTTCTTCATGCAACTTCATGTGGATTTAAGAGTAATTGGTCTTTCATGAGGAAAGTTTCCGGAAACAAAAACTCAAGAGTTGCATTAGAAAGAGCTCAGAAAATGATATATATTGCAGCTCATGCAAAGcttgaaaagagaaatttttcaAGCGAGGAAGAAAAAGATGCAGAATTGTTTGCCATTTCCGGAAGTGATGAAGATAGCATGCTAGCTGAAGTTTATGCCGATGCAATGCAATCTTAG 2532 0.3843 MSINESQTHHNNVETKTTFTTPISSKTHPILTLQLKEPQDTIFPTNSNTLLTKTMTSTNSTSTEPLPSSDEIAIKAVNKRYEGLVTVRTKAIKGKGAWYWNHLEPILVRNPDSGVPKSVKLKCCLCDSVFSASNPSRTASEHLKRGTCSNFNNSGFKNEPGSVPSPVPISSVSGSNRKRGSPHQIGVSVSVSTSPTSLTYQNHNLALVEIGYPQVHGNMVNHQNQNQNHQNHLMLSGGKEDLCALAMFEDSVKKLKSPKTSPGASLSKEQVNSALDLLADWFYECCGSVSLSTLEHRKFQAFLSQVGLPVGNGLRREVSGPRLDARFSEVKSESEAKIRDAMFFQVASDGWKSYNNNSNNNISINSNSNNRNCNGLCCGGESLVKFMVNLPNGSSVFQKAVFTGGGVVNSKYAEEVLWETVTGVSGSVVQRCVGIVADKFKDKALRNLEIQNHWMVNTSCQLQGFLSLIKDFNKELDLFGVVTKNCLKVANFVDTESQVRNVFVNYRMQEMEYAGLIRVPSPKCDPLKNFASVFPMLEDILSCARIIQMVVMEEAFKVMFMEDPHAREVAGLVRNEVFWNELEAVYSLVKIIKEMVQDIEAERPLIGRCLPLWEELRTKVKEWCGKYNVVEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKFLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPLTGKMKVANPLSSRLVWETCLCEYKSLGKIAVRLIFLHATSCGFKSNWSFMRKVSGNKNSRVALERAQKMIYIAAHAKLEKRNFSSEEEKDAELFAISGSDEDSMLAEVYADAMQS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03313 843 PANTHER PUTATIVE ISOFORM 1-RELATED 65 839 - -
Tsu06g03313 843 PANTHER OSJNBA0013A04.12 PROTEIN 65 839 - -
Tsu06g03313 843 MobiDBLite consensus disorder prediction 153 184 - -
Tsu06g03313 843 SUPERFAMILY Ribonuclease H-like 436 805 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03313 Tsu-Chr6 43986163 43989046 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03313 - - cam:101508329 1378.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03313 06 43986163 43989046 Tsu06g03313 06 43986163 43989046 ECH