Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03300 ATGAAAGGTATGAGTTGGAGGGTTGCATCTCCTAAAGGCTCTTCGAATCCGAAACCACTTTATTGGATTGTAGTTTCAATTGGATTAGTGGCAGTATTCATTACTTTTGCTTCATGGTGTTTTGTATCATACCCTATTGGTTCAACTGTTCATGGTTATATCTATGGTGTAGAAAGTTCACAAATTTCTGGTTTATCGGGCTCTCAAAAAATCAATATAACTTCTGTTGATCTTCACATGAATGCAAGTTTAGATTTAGTAGATAATAAAGCACCTAGCaagatagaaaaaaattatacaaatttaGATTCACATGTACCCTTTAGTGAATCTGCCTCACCAAAAATTGTTTCGGTAACTAAGGAGGTAAATGGCCTCGAAACTTCTGATGCAGTGGCTTCAAAAGCATCTATTCCAGTGACCGGTACCAATTCTTCCATTGTGAAAGGTTGTGATCTATACCATGGAAATTGGATATATGATCCATTGGGACCATTATACATGAACAACTCGTGCCCTATATTGACACAGACACAGAATTGTCAGGGTAATGGGAGGCCTGATAAGGATTATGAGAATTGGCGATGGAAGCCTTTTCAGTGTGACATTCCACGATTTGATCCGAGGAAGTTTTTGGAGCGAATGAAAGGCAAGACATTGGCTTTCATTGGAGATTCAGTGGCTCGAAACCAGATGGAGTCCATGATGTGTATTCTCTGGCAGGTAGAGGAACCAAAGAATCAGGGAACTCGCAACATGCAGCGATATTATTTTGAGTCTACATCTTTAACGATTGTTCGGATATGGTCATCATGGCTGGTCAAACACAATTCAGAACCATTTGACTTTGCTCCAGCTGGTGTGGAGAAACTCTATCTTGAATCCCCTGATGAGATGTTGATGGAATTTCTCCCAACATTTGATGTGGTTGTTCTTTCTTCTGGCCATTGGTTTATGAAACAATCCGTATATATCTTGAACAATGAAATAGTTGGAGGCCAATTGTGGAGGCCAGACAAGTCTCGGCATATGAAGATTAACAGTGTTGAAGCATTTGGTATATCCGTTGAAACAATTCTTACAGCTCTTGTTACGCATCCGAATTATACCGGGCTTACAATTTTGCGTTCCTATTCGCCTGATCATTATGAGGGTGGTGGATGGAACACTGGTGGGTCATGCACCGGGAAAGTTAAGCCTCTTGCAGTTGGTGAACTAGTTGAAAATAAGTATCTAGCTTCGATGTATGAGCAACAGGTTAAAGGTTTTAACCGTGCGGTAAAAAAGGCGAAAAATGGTTCAAAGATAAGATTGATGGATATTACTGAAGCCTTTCAATACCGGCATGATGGTCATCCTGGTCCATATAGGAGCACTGATCCTAACAAGATTACGAAACGTGGCCTAGATGGAAGGCCGCCACCACAGGATTGCTTGCACTGGTGCATGCCAGGACCTGTAGATACTTGGaatgaaattgtgtttgaaATCATAAAGAGAGAATATGAAGGTGATAGAATATCAtga 1527 0.3982 MKGMSWRVASPKGSSNPKPLYWIVVSIGLVAVFITFASWCFVSYPIGSTVHGYIYGVESSQISGLSGSQKINITSVDLHMNASLDLVDNKAPSKIEKNYTNLDSHVPFSESASPKIVSVTKEVNGLETSDAVASKASIPVTGTNSSIVKGCDLYHGNWIYDPLGPLYMNNSCPILTQTQNCQGNGRPDKDYENWRWKPFQCDIPRFDPRKFLERMKGKTLAFIGDSVARNQMESMMCILWQVEEPKNQGTRNMQRYYFESTSLTIVRIWSSWLVKHNSEPFDFAPAGVEKLYLESPDEMLMEFLPTFDVVVLSSGHWFMKQSVYILNNEIVGGQLWRPDKSRHMKINSVEAFGISVETILTALVTHPNYTGLTILRSYSPDHYEGGGWNTGGSCTGKVKPLAVGELVENKYLASMYEQQVKGFNRAVKKAKNGSKIRLMDITEAFQYRHDGHPGPYRSTDPNKITKRGLDGRPPPQDCLHWCMPGPVDTWNEIVFEIIKREYEGDRIS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03300 508 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 118 505 IPR029962 GO:0016413
Tsu06g03300 508 MobiDBLite consensus disorder prediction 449 470 - -
Tsu06g03300 508 Pfam PMR5 N terminal Domain 150 202 IPR025846 -
Tsu06g03300 508 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 203 496 IPR026057 GO:0016740
Tsu06g03300 508 PANTHER PROTEIN YLS7 118 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03300 Tsu-Chr6 43836749 43841218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03300 - - ahf:112729503 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03300 06 43836749 43841218 Tsu06g03300 06 43836749 43841218 ECH