Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03153 ATGGCATCTACCCAATTTGGCTTCACAAGATCCAATCCGGGTCGGAAACTTCGGGTTGTAGCAAAAATCCGTGGCTTTTCAGATCAAGATTCCAATTTCGGAACCGTAGATTGGGTTTCGGTTAACACAGAAAATTCAGGGGATGTTACTATCTCCTTTAAAGAACAATCTTCTAGTCAGTATTCAGTTGACTATTGTTATAAGGAACATGAAGATAATGAAAGTATCTATATAAGGGAGGTGAAGCCTCTTGTTTCGGCAGCTTTTGAAGGAATTAACAGCACTATTATTGCTCATGGAGCTAGAGGCAGTGGAAAAACTCAATTACTTCAGGGCTCTTCTGAAAGACCGGGTTTGGCAGTGTTCGCTATTTCCGAGTTTCTCTCTATGGCTGAGAAAAATGGGAAATCAATAGCAGTTTCTTTCTATGAGGTAGATCATCAGGACCATGCTGTTGATTTATTAAATCCAGAACAACCGCCAATTTCGGTGCTTGAAGATCACGGAAGAATTCAGTTTAAAGGACTTACTCAGACTCCTGTGAAATCCATTGCCGAATTTCAGAATTTATACATCACAGCATGTTCTTCACACAAGGCTGCAACCCAAAAAGGCTTTGAGCGTGTTCGTAGGAGCCACATGGGATTAATTGTGCATGTCTTTTCCCAGAATGAAACCGTAGATGGTCTTGTGGGCAAAATGACTTTTGTAGATATGGCAGGTTATGAAGATGCTAGAAGGAAAAGTAGTGATGCCTCTGGTCATATTgagaataaacaaattaataagtCAATTTACACCTTACTGAATGTTTGTCATGCTTTGAGCACAAATGAAAGTCGTGTTCCTTTCCGGGAAAGTAAACTGACACGCATGTTGCAGGACTCCTTGAGGGGAAATAGCAAAATTTTGTTGGTTTCGTGCTTGAACCCATCATTTTGCCAAGACACTGTTTACATGGTAAGCTTAGCATCACGGTCTCGAAGCACCTTAGACTCCACGAAGAAAACTGCAACGTCAACCAGACCGACTACTACTTTGGATTCCACAAAGAAAAATGCAAGTTCAGTAAGACAGATAGCGACCTCAGATTCCTCAAAGAACAGTGCAAGTTCAGTTAAACCGACAGTAACCTTAGATCCCACAAAGAGAAGTGAAAGTTCAGTAAGACAGACAGTGGCCTCAGATTCCTCAAAGAAAAGTGCAAGTTCGGTAAGACAGACAGTAACCTTAGATTCCACAAAGAAAAGTGAAAGTTCAATAAGACAGACAGTGGTCTCAGATTCCACAAAGATAAGTGTGAGTTCAGTAAGACAGACAGTAAACTTAGATTCCACAAAGAGAAGTGAAAGTTCAGTAAGACAGACAGTGGCCTCAGATACCTCAAAGAAAAGCGAAAGTTCAGTAAGACAGACAGTGGCCTCAGATACCTCAAAGAAAAGTGCAAGTTCAGTAAGACAGACAACAGCGGCCTCAGATTCCACAAAGAAAAGTGCAAGCTCAGCAAGACAGACAGTGGCCTTAGATTCCACAAAGAAAAGTGCAAATTCAGCAATACAGACAGTGACTTATCGCAAAAACAAGGTACCCAAAAATGTATCAGCTTCAGCAACGACAAAGAAATTACCAGGTTCCATATCTCATACATATGAAAATAAAGGTGTTGTTGCTACGAAGACTGAAATAAGAGGAAGGAAATTGTTTGACGAAGCCAGCCACTCTGCTACTAAAGCTGAGAAGGACAATTCAACATCAAAAGATGGAATTGATGTCCAAGTAAACCCTAGAGTAGATATGGAAATTTCCATTGCCAATGTTAGCAAAGCATCGGAGCCTTTATTGGATAATTCATTATCAGAAGATGGAGATCATGTTGAACTAAACTCTAGAGTTGAAAagGATGACTCATCTTTGAATGATAGCAGTGAAGTGGAACTTGATCCCATAGTGGAAAAGAAGGGAGTGTTGAGCGATGATTTTTTAACAAATCATGTGATTCATGTTTATATAGGGTCTTTTGTCATTACAGGTCATAACATGAACAAGGAGAACAACAACTTCATGAAAAACGGAGAATTTTCACCACCTATTAGTTCTCAATTGCGTGAACTTCAATCTCTTGTTTCATCAACTCCATTATGCATGGAGTTACCAAAGAACGGATGTATTTCACTTGTTGATGATCAGATTTCTACTAAAATTGCAGAACCAAGAACTCCTGATATTGAAAAACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAACGGTTCTGAAAAACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAACGTCATGCATGGTTCTGGAATGGAGAATTCTACTGAAATTAAAGAACCAAGAACTCCTGATATTGAAAGACGAGATGTAATGAATGTCAAAAGTCCATGGGAAGCATTCAACGTGCATGGTTCTGGAATGAAGAATTCTCTTGTTAAGGACTACCTTAGAATTTTAAACACGGCTGAAAAGGATGAATTAAAGAAGTTAAAGggaattggagagaagaGAGCAACCTATATACTTGAGCTCCGGGAAGAATCCTCAGAACCTTTCAAGAGTCTTGATGATTTGAAGGACATTGGACTTTCAGAAAAACAGATTAAGGGAAtgatgaagaaggaaattgGAGAGCTTTTCAATTAG 2682 0.3863 MASTQFGFTRSNPGRKLRVVAKIRGFSDQDSNFGTVDWVSVNTENSGDVTISFKEQSSSQYSVDYCYKEHEDNESIYIREVKPLVSAAFEGINSTIIAHGARGSGKTQLLQGSSERPGLAVFAISEFLSMAEKNGKSIAVSFYEVDHQDHAVDLLNPEQPPISVLEDHGRIQFKGLTQTPVKSIAEFQNLYITACSSHKAATQKGFERVRRSHMGLIVHVFSQNETVDGLVGKMTFVDMAGYEDARRKSSDASGHIENKQINKSIYTLLNVCHALSTNESRVPFRESKLTRMLQDSLRGNSKILLVSCLNPSFCQDTVYMVSLASRSRSTLDSTKKTATSTRPTTTLDSTKKNASSVRQIATSDSSKNSASSVKPTVTLDPTKRSESSVRQTVASDSSKKSASSVRQTVTLDSTKKSESSIRQTVVSDSTKISVSSVRQTVNLDSTKRSESSVRQTVASDTSKKSESSVRQTVASDTSKKSASSVRQTTAASDSTKKSASSARQTVALDSTKKSANSAIQTVTYRKNKVPKNVSASATTKKLPGSISHTYENKGVVATKTEIRGRKLFDEASHSATKAEKDNSTSKDGIDVQVNPRVDMEISIANVSKASEPLLDNSLSEDGDHVELNSRVEKDDSSLNDSSEVELDPIVEKKGVLSDDFLTNHVIHVYIGSFVITGHNMNKENNNFMKNGEFSPPISSQLRELQSLVSSTPLCMELPKNGCISLVDDQISTKIAEPRTPDIEKRDVMNTKSPWETFNGSEKRDVMNTKSPWETFNVMHGSGMENSTEIKEPRTPDIERRDVMNVKSPWEAFNVHGSGMKNSLVKDYLRILNTAEKDELKKLKGIGEKRATYILELREESSEPFKSLDDLKDIGLSEKQIKGMMKKEIGELFN 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03153 893 SMART kinesin_4 14 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g03153 893 PANTHER KINESIN-RELATED 783 888 IPR027640 GO:0003777|GO:0007018
Tsu06g03153 893 SUPERFAMILY RuvA domain 2-like 828 887 IPR010994 -
Tsu06g03153 893 MobiDBLite consensus disorder prediction 329 515 - -
Tsu06g03153 893 PRINTS Kinesin heavy chain signature 233 251 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g03153 893 PRINTS Kinesin heavy chain signature 282 303 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g03153 893 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g03153 893 Gene3D Kinesin motor domain 6 330 IPR036961 -
Tsu06g03153 893 MobiDBLite consensus disorder prediction 568 589 - -
Tsu06g03153 893 PANTHER KINESIN-LIKE PROTEIN KIN-10C 783 888 - -
Tsu06g03153 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 328 IPR027417 -
Tsu06g03153 893 MobiDBLite consensus disorder prediction 568 586 - -
Tsu06g03153 893 PANTHER KINESIN-LIKE PROTEIN KIN-10C 16 461 - -
Tsu06g03153 893 Gene3D - 819 891 - -
Tsu06g03153 893 Pfam Kinesin motor domain 23 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g03153 893 PANTHER KINESIN-RELATED 16 461 IPR027640 GO:0003777|GO:0007018
Tsu06g03153 893 PANTHER KINESIN-RELATED 482 778 IPR027640 GO:0003777|GO:0007018
Tsu06g03153 893 ProSiteProfiles Kinesin motor domain profile. 16 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g03153 893 Pfam Helix-hairpin-helix motif 831 879 - -
Tsu06g03153 893 PANTHER KINESIN-LIKE PROTEIN KIN-10C 482 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03153 Tsu-Chr6 41861426 41867922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03153 19 329 Miscellaneous Gene Families AT4G39050 28.571 5.24e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03153 K10403 - gmx:100809612 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03153 06 41861426 41867922 Tsu06g03153 06 41861426 41867922 ECH