Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03041 ATGATGAGGATGAggaataatcataatcatagcAATAAGACAAATGGTGTTTCTTCACCAATAAGTTCAGGTGGTTGCAGAACTGCTGAACCGGGTTCAAATGAATGGGAGATGAGGCCAGGTGGAATGTTGGTTCAAACAAGAACTACTGCTTCAGATCGAAACCCTGTTTTGGTTCCTACAATTAGAGTTAGAGTCAAGTTTCGTTCAATTTATCATGAAGTCAACATTAGTTCACAAGCCTCATTTGgtgatttgaagaaaatgttAACAGGACCAACTGGTTTACATCATCAAGATCAAAAGTTGTTTTACAAAGATAAAGAGAGGGATTCTAAGGCTTTTCTTGACATAGTTGGTGTAAAGGACAAATCAAAGCTAGTTCTAATGGAAGATCCTATTAGTCAAGAGAAAAGGGCTTTGGAGATAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCTATCTCACAAATCAGCTTGGAAGTAGATAGACTTGCCGGACGGGTATCTGCCTTTGAATCAATAATTAGCAAAGGTGGGAAAGTTGTGGAATCAGATGTGCTTGGTCTTATTGAGCTATTGATGAATCAATTGCTTAAATTGGATGGTATAATTGCTGATGGAGATGTCAAATTGCAAAGAAAAATGCAGGTAAGAAGAGTTCAAAAGTATGTTGAAACATTGGATATGCTAAAAGTCAAAAACTCTATGACAAATGGCAATGATGTTCAAGCTTCAAAACAATCTTCACAAAAGCATTCAAATGGGAAAAGATTGGAACCAATTCAAgaacaaccacaacaacaacaacaaattcatTCAAATGGATATGATAGGTCAATAGTACCAATtcaagaacaacaacaagaacaaccTAGGAGCAACTCAAATGAACTTTCACTAGTATTTGAGGAACAACAAAACCAAACCTCAGGAGTTGTAGTTACTACAAAATGGGAAACATTTGATTCTACCCCACCATTAATCACATTTCCATCTACATCCACAACTACTCCTTCAATGACcaacaataataatactaataataataattcaggTCCTCCTAAGTTCAGTTGGGAATCCTTTATGTGA 1095 0.3279 MMRMRNNHNHSNKTNGVSSPISSGGCRTAEPGSNEWEMRPGGMLVQTRTTASDRNPVLVPTIRVRVKFRSIYHEVNISSQASFGDLKKMLTGPTGLHHQDQKLFYKDKERDSKAFLDIVGVKDKSKLVLMEDPISQEKRALEIRKNAKMEKAAKSISQISLEVDRLAGRVSAFESIISKGGKVVESDVLGLIELLMNQLLKLDGIIADGDVKLQRKMQVRRVQKYVETLDMLKVKNSMTNGNDVQASKQSSQKHSNGKRLEPIQEQPQQQQQIHSNGYDRSIVPIQEQQQEQPRSNSNELSLVFEEQQNQTSGVVVTTKWETFDSTPPLITFPSTSTTTPSMTNNNNTNNNNSGPPKFSWESFM 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03041 364 MobiDBLite consensus disorder prediction 327 364 - -
Tsu06g03041 364 MobiDBLite consensus disorder prediction 236 253 - -
Tsu06g03041 364 Gene3D - 61 131 - -
Tsu06g03041 364 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 1 339 - -
Tsu06g03041 364 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Tsu06g03041 364 SUPERFAMILY BAG domain 115 237 IPR036533 GO:0051087
Tsu06g03041 364 ProSiteProfiles BAG domain profile. 155 233 IPR003103 GO:0051087
Tsu06g03041 364 ProSiteProfiles Ubiquitin domain profile. 64 130 IPR000626 GO:0005515
Tsu06g03041 364 Pfam BAG domain 156 231 IPR003103 GO:0051087
Tsu06g03041 364 SMART BAG_1 155 233 IPR003103 GO:0051087
Tsu06g03041 364 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 339 IPR039773 GO:0051087
Tsu06g03041 364 SUPERFAMILY Ubiquitin-like 54 136 IPR029071 -
Tsu06g03041 364 MobiDBLite consensus disorder prediction 1 39 - -
Tsu06g03041 364 MobiDBLite consensus disorder prediction 7 29 - -
Tsu06g03041 364 CDD Ubl_AtBAG1_like 61 130 - -
Tsu06g03041 364 MobiDBLite consensus disorder prediction 236 274 - -
Tsu06g03041 364 Gene3D BAG domain 132 237 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03041 Tsu-Chr6 40130300 40133469 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03041 - - gmx:100819022 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03041 06 40130300 40133469 Tsu06g03041 06 40130300 40133469 ECH