Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02992 atgctTGCACTCACTAATTCGCCTCTACTTATTGCTAAATCATatgaagaaattaaaataacaagtACACGAAGCATTATTGTGgtATGTGCTGCTGCTAAAGGTCCAAGACCAAGATATCCACGAGTTTGGaagactaataaaaaaattggtaccATTTCTAAAGCTGCTAAGCTTGTTCAATCGATTAAGGAACTTTCAAATGTGAAAGAGGAAGTTtacggagctcttgatacctaTGTCGCTTGGGAACTAGAATTTCCTTTAGTTACAGTGAAAAAGGTACTCAAGACTCTACAACATGAGAAAGAGTGGAAGCGGATAATACAGGTAACAAAATGGATGTTAAGCAAGGGTCAAGGAAAGACAATGGGAAGCTATTTCACATTACTTAATGCTTTAGCAAAGGATGATCGACTAGATGAAGCAGAAGAGCTTTGGACGAAGTTATTAATGCGGTACACAGAAAGCTTGCCTCGTAAGTTCTTTGATAAAATGATATCTATCTACCGCAGAAGAAGCATGCATGACAAGATGTTTGAGGTATTTGCAGACATGGAGGAACTTAGTGTTAAACCTAGTATTTCTGTTGTCTCAACGGTTGGCAATGTCTTCAAGGAGCTAGGTATGATGGACAAATACGAGAAGTTACATCGAAAATATCCACCACCCAAATGGGAATATAGATTCATCAAAGGAAAGCGTGTAAAGATCAAGGTGCAAGGTCAGTCTAATTATGTCGACAAATACATAAGAAAGCATGACAATGTAGAACCAGATTCAGGCTTAAGAGACGATGATAGTTCAGAAGAGAATTCAGAGTTAACGGATGATGAACAGTTCGAACAAGATGCCGATGTAACACACATGGAACCTGAACAGATTTTTTATGAGTCATCTGAGAGTACGGAACCAAGTTTAGATGTATAA 930 0.3559 MLALTNSPLLIAKSYEEIKITSTRSIIVVCAAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKELSNVKEEVYGALDTYVAWELEFPLVTVKKVLKTLQHEKEWKRIIQVTKWMLSKGQGKTMGSYFTLLNALAKDDRLDEAEELWTKLLMRYTESLPRKFFDKMISIYRRRSMHDKMFEVFADMEELSVKPSISVVSTVGNVFKELGMMDKYEKLHRKYPPPKWEYRFIKGKRVKIKVQGQSNYVDKYIRKHDNVEPDSGLRDDDSSEENSELTDDEQFEQDADVTHMEPEQIFYESSESTEPSLDV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02992 309 Pfam PPR repeat 129 150 IPR002885 -
Tsu06g02992 309 Pfam PPR repeat 166 189 IPR002885 -
Tsu06g02992 309 PANTHER OS01G0757700 PROTEIN 4 286 IPR044646 -
Tsu06g02992 309 PANTHER OS01G0757700 PROTEIN 4 286 - -
Tsu06g02992 309 MobiDBLite consensus disorder prediction 295 309 - -
Tsu06g02992 309 TIGRFAM PPR: pentatricopeptide repeat domain 164 194 IPR002885 -
Tsu06g02992 309 MobiDBLite consensus disorder prediction 257 309 - -
Tsu06g02992 309 Gene3D Tetratricopeptide repeat domain 54 222 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02992 Tsu-Chr6 39291572 39298314 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02992 - - mtr:MTR_6g053090 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02992 06 39291572 39298314 Tsu06g02992 06 39291572 39298314 ECH