Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02990 ATGTCATCAACCTCAAACAACAAGAACGACGTTGATCGTTTGTTCGCATGCTTCAAATGCGGTTTATCACCTCCTAAATCTGCtttgattgaaagaaaaagGAGGAAAAGGAAATTGGAGAACGAAATTCCAAAGAATGGGTCACAGGCAGAATGTTCAAATCAAGGATCAATTGGAAGGGAAGAGAAAACCCCGTTATCTTGcatcaaaacaacaaatgtGGAATCTTCTATTGAGAAACTTAAATCAGCAATAGCTAAAGCCAAAAGCTGTAGTAATCGGAAGCAGATCTCACCAGTTGTATTCTATGGTTCTCCTCATGGTGTGCCTCCGAAAAGACCGACCAGTTTATGGCGATTGTTGCATGAGATACGTATTGATCTCTCACAGAGACAAAAACGGAACTTAAGGAAGGAATTATGGTTTACATTCCCAAGGCAGGATGAAGCAATAAACTTTGCCAAAGGAAAAGAAGATGTCCATCTCTTTAGCTATCAAGATCACTTCAATGGCCAGAGAAGATTCCTTGTGTCTACATATACAGAATTCTGGCGAAGGTACAAAAACATGAATTCAAAATTCCGTCATCATTATGAAGTGATTCAAGAGGGTTTACCATGCCACCTTTATTTTGATTTGGAGTTTAATAAAAGAGTCAACGTAGGAAAGAATGGAGACGAAATGGTTGATCTTTTAATATCAATAGTTCTAGAAGCCTTACATGAAAAGTATGAAATCCATGGAGACCACGATTGGATAGTAGAGCTCGACTCTTCAACTGAAGATAAGTTTTCTCGTCATCTAATAATTCGCATACCAAAGGCTGCTTTTAAGGATAACTCCCATGCAGGTGCATTTGTTTCAGAAATATGCTCAAGAATTGTAAATGCAAGGGGGAAAGATAAACATTATGAAAAATTGTTTATAGCAAAAGATTCAAGTACCGATGAATCTGCTTACCAACTTTTTGTGGATACTGCTGTATATACTCGGAATCGTTGTTTCCGTCTTCATCTATCTTCAAAGGCAGGAAAAAGTTCAACTCTTTTGCCAACAGAGAGATTTAAGTGCAAAAACTTGAGTGAAGAAGACATGTTCATGGCTTCCTTGATCTGCAACATGGATGTTGATTGCGGAAAGCTTCTGGTCTGCAAACCAGACTTAGATTGCGTGAAGACTCTGCATTTTGATACAGAGTTGAATTACAATGTTGGAAATTCTGTCCAACTTCATCCAGAATTTACCTTGAATACTTGCACAAGCGATGCTTCGAGAACATACTTCATGGGAAAGTCACCATTCCCATTTGTCGACGAATTTATATTATCTGTTGCCTCTGTTGGGAATATACCAGGAAAAATTCATAGTTGGTATTTATTCTCTGAATTTGGACTGATGGTCTACAGCATGACAAAAAATAGATACTGTGAGCGAATTGGCAGACAGCATAAAAGCAATAACGTGATATACGTTGTTGATCTAAGAAGGGCAGTGTATTATCAAAAATGTCATGATCCTGACTGTAGAGGTTATCGGTCTTCCTTGCGACCAATTCCAGTTCACGTGTTCTCCAATCATTCAGTTGCTATTGGTTCATCTGAGATGTTAGATGATAAATATCCAGTAGATGATGGGTGGGGACATCAACCTGATGATAACAACAAACCAAATTTTCTACAATACGAAGACACTGTTGAGGACTACTCCAATGATTCTTGGTGGCTAGAAGCCATAAAGGTAGTTGAGGATGTGGAAAATAAGCAAACAACAACGGAACTAAACACCAAGAAGGAGGCAATTGATGATGGAGATGATGAGGAGTGGTGGCTGGCTGTAGAAAGGACTGCATCCCAGGCTGAACTAGCATATACTTCAACTAATTCAGGATGTGATGGAAAGTGTGGAGACAATTGTGGTTGGGGATGTGGTGTTGTTAAAACTTGTTGGGATAATGGTGATAATGGGGATAGATCTGGTGGTTGTCGGGGTTCAAATTGTGGATATAGGGATAATGAAGGTTGGGGTAGTGTAGATGAGGCATCTGTAGCAGGGGTAGTGGTGGTGGTTATTGGAGTGGGAATAGTGGGTGGGGGTAGTATAAATGGGGGTAATTGTGATGTTATTTGTGGTTGGAGTAGCGATGTTAAAAATGTGGATATTGATTGTGGGGATTGA 2175 0.3899 MSSTSNNKNDVDRLFACFKCGLSPPKSALIERKRRKRKLENEIPKNGSQAECSNQGSIGREEKTPLSCIKTTNVESSIEKLKSAIAKAKSCSNRKQISPVVFYGSPHGVPPKRPTSLWRLLHEIRIDLSQRQKRNLRKELWFTFPRQDEAINFAKGKEDVHLFSYQDHFNGQRRFLVSTYTEFWRRYKNMNSKFRHHYEVIQEGLPCHLYFDLEFNKRVNVGKNGDEMVDLLISIVLEALHEKYEIHGDHDWIVELDSSTEDKFSRHLIIRIPKAAFKDNSHAGAFVSEICSRIVNARGKDKHYEKLFIAKDSSTDESAYQLFVDTAVYTRNRCFRLHLSSKAGKSSTLLPTERFKCKNLSEEDMFMASLICNMDVDCGKLLVCKPDLDCVKTLHFDTELNYNVGNSVQLHPEFTLNTCTSDASRTYFMGKSPFPFVDEFILSVASVGNIPGKIHSWYLFSEFGLMVYSMTKNRYCERIGRQHKSNNVIYVVDLRRAVYYQKCHDPDCRGYRSSLRPIPVHVFSNHSVAIGSSEMLDDKYPVDDGWGHQPDDNNKPNFLQYEDTVEDYSNDSWWLEAIKVVEDVENKQTTTELNTKKEAIDDGDDEEWWLAVERTASQAELAYTSTNSGCDGKCGDNCGWGCGVVKTCWDNGDNGDRSGGCRGSNCGYRDNEGWGSVDEASVAGVVVVVIGVGIVGGGSINGGNCDVICGWSSDVKNVDIDCGD 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02990 724 MobiDBLite consensus disorder prediction 32 58 - -
Tsu06g02990 724 PANTHER DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN 66 589 IPR044917 GO:0003887|GO:0003896|GO:0042276
Tsu06g02990 724 Pfam Herpesviridae UL52/UL70 DNA primase 460 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02990 Tsu-Chr6 39262226 39274360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02990 K22761 - gmx:100789800 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02990 06 39262226 39274360 Tsu06g02990 06 39262226 39274360 ECH