Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02984 ATGCATGAATATGAATATCCTTGTTGTGAGTATAATTTCTGGTTGTATCTAATTATATGTCTAGTGATTGTGTCATTAGCTGGCATTACATCAGGCCTAGCTTTAGGAATATTGTCATACAATCCAGTTGATCTTGAAGTTCTCATTAAATCAGGCAGaccaaaagataaaaaaaatgcagAAAGGATTCAGCCATTTGTAAAGCATGGACATTTTGTCTTGTGTACTCTTCTTCTAGGAAAATCATTGGCTATGGAGGCACTGCCAATTTTTATGGATACAATCATACCATCATGGTTTACTATTCTTATATCAGCACCATTGGTGACTGTTTTTGCAGAGATTTTACCTCAAGCTGTATGCTCTAGATATGGACTTACTTTTGGAGCAATATTGGCTCCTTTTACTCATTTGCTTCTGTTGATCTTCTTCCCAATAACTTATCCAGCTAGTAAGCTGCTGGATTGGGCTCTAGGAAAAGAACATTCAGTTATTTTAAGAAGATCAGAGTTGAAGACATTTGTGGACTTACATGCAGATCAGGCAGGAAAGGGTGGAGAATTGTCACATCATGAAACTTCTATAATCACAGGTGCTATGGATTTGACTCAGAAGACAGCTATAGATGCAATGACACATATATCTGACACTTTTTCTCTTGATATAAATTCCAAATTAGACATgCATACAATGACACAAATTATGAGTAAAGGTCACAGTAGAGTACCTATTCATTCTGGCAATCCAAGAAATATTATTGGCCTAATCTTGGTTAAGAATTTAATCTTCTGCAGACCAGAAGATGAGACACCAATCAAGAATTTGATTATCAGGAAAATTCCTAGGGTATATGAAAGTTGGCCACTGTATGAGatattgaatcaattcaagaaaGGTCATAGCCATATGGCTGTTGTTTTGAAGGGAAAAATGGAAACAGAAAGCAATGAAGCTCATGCTGTGGATTCACCTATATTTTTGAATATAATAACTAATAAAGAATCAACCCAAGCTCAAATTAATATTGGAGAATCAAATTCTTCCTATGTACTGGAAATGAGTCAGAGAAGTTCAATTCAAGAAACATTGTGTTCTAGTGATGTGGAATTTCATAGTCCAACATTAGAAAATATGATGGTACTAGACAATGAAGTAGGACAAGAATCAAAGCAATGGGATCAAGAAATTGGATGTATGACACATGAACAAATAATGTCTCTTAATTCAACTGTTATGCATGATGAGGCTATTGGTATCATTACAATGGAGGATCTTATGGAGGAATTATTACAGGGAGACATATTGGATGAAACTGATGAATATGTTCACCTTCAAAAGAACATTAGAATTAACCTGCAGCAATCACATAGATCACAATCAAGATCATCAAGAAGAACTTTTGGATCCAGTCGTCGTTGA 1419 0.3432 MHEYEYPCCEYNFWLYLIICLVIVSLAGITSGLALGILSYNPVDLEVLIKSGRPKDKKNAERIQPFVKHGHFVLCTLLLGKSLAMEALPIFMDTIIPSWFTILISAPLVTVFAEILPQAVCSRYGLTFGAILAPFTHLLLLIFFPITYPASKLLDWALGKEHSVILRRSELKTFVDLHADQAGKGGELSHHETSIITGAMDLTQKTAIDAMTHISDTFSLDINSKLDMHTMTQIMSKGHSRVPIHSGNPRNIIGLILVKNLIFCRPEDETPIKNLIIRKIPRVYESWPLYEILNQFKKGHSHMAVVLKGKMETESNEAHAVDSPIFLNIITNKESTQAQINIGESNSSYVLEMSQRSSIQETLCSSDVEFHSPTLENMMVLDNEVGQESKQWDQEIGCMTHEQIMSLNSTVMHDEAIGIITMEDLMEELLQGDILDETDEYVHLQKNIRINLQQSHRSQSRSSRRTFGSSRR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02984 472 CDD CBS_pair_CorC_HlyC_assoc 206 307 IPR044751 -
Tsu06g02984 472 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 344 IPR045095 GO:0010960
Tsu06g02984 472 MobiDBLite consensus disorder prediction 453 472 - -
Tsu06g02984 472 Gene3D - 192 332 IPR046342 -
Tsu06g02984 472 PANTHER DOMAIN PLANT PROTEIN, PUTATIVE-RELATED 1 344 - -
Tsu06g02984 472 SUPERFAMILY CBS-domain pair 195 431 IPR046342 -
Tsu06g02984 472 Pfam Cyclin M transmembrane N-terminal domain 18 188 IPR002550 -
Tsu06g02984 472 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02984 Tsu-Chr6 39184881 39191846 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02984 K16302 - gmx:100791387 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02984 06 39184881 39191846 Tsu06g02984 06 39184881 39191846 ECH