Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02930 atgaCGGATGTGATACTGCATATATATGATGTGACGAATAGTGGATCCGAAAAAGCTAATAATACCATTCTTCAGATCAATAAGATCTTTAAGGATGGTATTGGTCTTGGTGGCATTTTTCATAGTGCTGTTCAGGTTTTTGGAGATGATGAATGGTCATTTGGGTATTGCGAGCAAGGTACTGGAGTTTTTAGTTGCCCTTCTGGACAGAATCCAATGTATACCTTTCGTGAATCCATTGTTCTAGGGAAAACAAACTTTTCCATTTTCAAGGTAAATCAAATAATAAGAGAACTCAGTAGAGAATGGCCTGGAAATTCATATGATCTATTGTCCAAAAACTGCAACCACTTCTGTGATGAATTCTGTGAAAGACTTGCTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCGAATGCTGGTGATACTGCCATGGAAGTTGCTGGGAATACAGCATTACGGGTGAgttatgaatttcaaaatcctCTTCCTAAGTGTTGTGTTACACTATTTCCTTCAATTGTCTGTCTCATTGGAACCTggattttcttttgcttttggCTTTGA 570 0.3579 MTDVILHIYDVTNSGSEKANNTILQINKIFKDGIGLGGIFHSAVQVFGDDEWSFGYCEQGTGVFSCPSGQNPMYTFRESIVLGKTNFSIFKVNQIIRELSREWPGNSYDLLSKNCNHFCDEFCERLAVPKLPGWVNRFANAGDTAMEVAGNTALRVSYEFQNPLPKCCVTLFPSIVCLIGTWIFFCFWL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02930 189 Pfam PPPDE putative peptidase domain 3 146 IPR008580 GO:0008233
Tsu06g02930 189 Gene3D PPPDE domains 1 162 IPR042266 -
Tsu06g02930 189 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Tsu06g02930 189 PANTHER EXPRESSED PROTEIN 1 156 - -
Tsu06g02930 189 PANTHER DESUMOYLATING ISOPEPTIDASE 1 156 IPR008580 GO:0008233
Tsu06g02930 189 SMART DUF862_2a 2 155 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02930 Tsu-Chr6 38533463 38539399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02930 - - mtr:MTR_6g048290 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02930 06 38533463 38539399 Tsu06g02930 06 38533463 38539399 ECH