Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02890 ATGGCTTCTCATTACGAACTTGAACTAACCCTCACATCAGCAAAACAACTCAAAAACGTAAACTGGCGCCATGGCACTAACAAACCATACGCTGTCGTTTACATCGATCCAATTATCAAATTCACAACAAACATAGATCAAAACGGTAACACAGAATCTCAATGGAAAAATCAAACACTAATTCTCCCTTTACCTTCAAAACCAATCAAAGATCTCATTTTATACATTCAAATTGTTCATGCTGGATTTGAAGAAATCACAAAGAAACTCATTGGTTCGGCTCGGCTTAAAGTAAttgaagtttttgaaaatggaatTGGTAAGCGTGTGAGTCGCATGCTTACATTGGAAAGACCTTCTGGTAGACCACAGGGGAAGGTTGAAGTTAAGGTTGGGATTAGAGAAAGTTGCTATTGTGTGCAGGGTGTGGATTTTGGAAATGAAGAATTTAAATCGAGGGAGTGTTCCTCTACTTCGCGGTTGCCTCAGCAACGTTATAACGCGGGAGGTTATACGGCGTCGTATGGGGAAGTGAGGGGAAAGAGAAAGAGTGAGTTTGGTGAGATGGGGATAGGATTTGCTGTGGGTGCTGTTGCTGGGATTTTGGGTGAACTTGCATTTGAGAAAGGTGTTGAGTATATTGAAGATAGGATTGTTGATGAAGTGGTGGAGAGAGTTGAGGATGATCTTGGTAGTAGTGATGATGATGTGGCGGAGAATGTCGaggatgatggtgatgatgatgatgatgatgatgataatgtggCCGAGAATGTTGAGGATGATGTTGGTTATGATGATGACATGGGGGAGATTGTTGACGATGATTTTGGttacgatgatgatgatgatggttacGATGGAGATGATTTTTAG 876 0.3767 MASHYELELTLTSAKQLKNVNWRHGTNKPYAVVYIDPIIKFTTNIDQNGNTESQWKNQTLILPLPSKPIKDLILYIQIVHAGFEEITKKLIGSARLKVIEVFENGIGKRVSRMLTLERPSGRPQGKVEVKVGIRESCYCVQGVDFGNEEFKSRECSSTSRLPQQRYNAGGYTASYGEVRGKRKSEFGEMGIGFAVGAVAGILGELAFEKGVEYIEDRIVDEVVERVEDDLGSSDDDVAENVEDDGDDDDDDDDNVAENVEDDVGYDDDMGEIVDDDFGYDDDDDGYDGDDF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02890 291 MobiDBLite consensus disorder prediction 227 291 - -
Tsu06g02890 291 Gene3D C2 domain 1 135 IPR035892 -
Tsu06g02890 291 PANTHER INGRESSION PROTEIN FIC1 1 234 - -
Tsu06g02890 291 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 132 IPR035892 -
Tsu06g02890 291 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Tsu06g02890 291 Pfam C2 domain 6 100 IPR000008 -
Tsu06g02890 291 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Tsu06g02890 291 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02890 Tsu-Chr6 38056674 38057549 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02890 - - gmx:100817630 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02890 06 38056674 38057549 Tsu06g02890 06 38056674 38057549 ECH