Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02556 atggaACTTTCAAGTTTTGAAGAAGCTGCCAAAAAAAGTTTAGAAGACAAAAATAAAGAAGTGATTCGAATAGAACGTGAATCCGTCATACCAATTTTGAAACCTAAGCTCTTCATGACATTGGCTAATCTTATTAAGCATAGTTCTGATCGAGCAGAGTTTTTGAAGCTTTGCAAGAGAATAGAGTATACAATTAGAGCTTGGTACCTTCTACAGTTTGAGGATATGATGCAACTGTATTCACTCTTTGATCCAGTTTCTGGGGCCCAAAAGTTGGAACAACAAGGCTTAACTTCTCATGAAATTGATGTACTTGAACAAAACTTCTTGAGATACCTCTTTGAGGTCATGAAAAAAAGCAATTTCAAGATTGCAACTGATAATGAAATCAATGTTGCACTTTCTGGACAATATCTTCTAAATCTTCCCATCACTGTTAATGAATCTAAGCTTGACAATAagcttttgaaaaaatattttgaagcACATCCCGTTAATGACCTTCCAGATTTCCATGATAAGtatgTCATATTTCGGCGTGGCATTGGCATTGATCGAACGACGGATTACTTTATAATGGAGAAAGTAGACATGCTCATTGCACGTTTCTGGGCATATCTATTAAAAAGACTCAGGTTGGAAAAACTGATTTCAAAACGATCAAAAAAACATGGTAAGAAGTTGGATCCAAAGAAGGACGATGAAATAAAGTCGGAAGATTGTCAAGATGATGTATACGAAAGGATACGTCTTGAAAATATGCCATTGAGTTCTGGTACTTTGCTAAGCAAGACCTTAATTCAAGAACCTACATTTGATAGGATCATTGTTGTTTACAGGCGAGCCAGTACCAATTCAAAACAAGAAAGAGGAATTTTTGTGAAGCATTTCAGAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAATCCTGGATTGACACCAATGGATTGGGTGAAGTTTCTAGCAACTGCTATTGTTGGGTTGGTAGCTGTTCTTAGTTCCCTTCAAGCAGCTACAACTGATTTGAGGGTTATTGGTGCTATTCTCTCTACAATTGGTGGTTATTGTGTTAAAACATATTTCACGTTCCAACAAAACTTGGCTGCATATCAAAATATGATAACACAGTCAATGTATGATAAACAGCTAGACAGTGGAAGGGGTACACTTCTCCATTTATGTGATGATGTCATTCAACAAGAAGTGAAAGAGGTTATGATTGCATTCTTTATTTTAATGGAACAGGGAAAAGCTACAAGACAGGAACTGGATCAAGGGTGTGAAGATTTAATCAGAGAAGAGTTCAATGAGACATGCAATTTTGATGTAGATGATGCTGTTCACAAACTTGAGAAGTTAGGAATTGTCACTCGGGATCCTATAGGGCGATATCAATGCGTTGGATTGAAAAGGGCTAATGAGATAATTGGTGTTACCACCGAAGAGCTTGTAATTAAAGCAAAACAAGGAAACAACACTACTCTTTGA 1503 0.3586 MELSSFEEAAKKSLEDKNKEVIRIERESVIPILKPKLFMTLANLIKHSSDRAEFLKLCKRIEYTIRAWYLLQFEDMMQLYSLFDPVSGAQKLEQQGLTSHEIDVLEQNFLRYLFEVMKKSNFKIATDNEINVALSGQYLLNLPITVNESKLDNKLLKKYFEAHPVNDLPDFHDKYVIFRRGIGIDRTTDYFIMEKVDMLIARFWAYLLKRLRLEKLISKRSKKHGKKLDPKKDDEIKSEDCQDDVYERIRLENMPLSSGTLLSKTLIQEPTFDRIIVVYRRASTNSKQERGIFVKHFRNIPMADMEIVLPEKKNPGLTPMDWVKFLATAIVGLVAVLSSLQAATTDLRVIGAILSTIGGYCVKTYFTFQQNLAAYQNMITQSMYDKQLDSGRGTLLHLCDDVIQQEVKEVMIAFFILMEQGKATRQELDQGCEDLIREEFNETCNFDVDDAVHKLEKLGIVTRDPIGRYQCVGLKRANEIIGVTTEELVIKAKQGNNTTL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02556 500 PANTHER AMINOPEPTIDASE 3 499 - -
Tsu06g02556 500 Coils Coil 7 27 - -
Tsu06g02556 500 PANTHER AMINOPEPTIDASE (DUF3754) 3 499 - -
Tsu06g02556 500 Pfam Protein of unknown function (DUF3754) 272 393 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02556 Tsu-Chr6 32975580 32983088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02556 - - mtr:MTR_6g033240 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02556 06 32975580 32983088 Tsu06g02556 06 32975580 32983088 ECH
Tsu07g02890 07 34120685 34126084 Tsu06g02556 06 32975580 32983088 PCT