Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01785 ATGACAGTTTCAACTCGATCTCACACAAAGAACAATGCAAACcctaatcaacaacaacaacaacaaccacatcAAGGTTTAAAGGAGAAATTGAAAGCACTAACACTGTTATACGAGCAACACAACCTCAAGAACCGTTCTTTCAATCCAGAACAAGAAGAGAATCATAAGGAAAACGTGAAGATCAATGTTGTGGCGGCTCGGAAGAAGCTTTCGTTGGTTGAAACGGAGAAAAATGGGAACAGGATAATGGTGTTTGTGAGAGTGAGGCCAATTGGGAAGAAGGAAAAGGAAGCAGGTTCGAGGTGTTGTGTGAAGACTGTGAATCGCCGTGATGTTTATTTGACGGAATTCGCTAGTCCAGAGGATTATTTGAGGTTGAAGAGGATTCGCAGTGGTCATTTCACGTTTGATGCTTGCTTTCCTGATTCAGCTACTCAACAGGAAGTTTATTCTACCTCTACCTCAGAACTTGTGGAAGCAGTTCTACAAGGGAAGAATGGGACAGTTTTCTGTTATGGTGCCACTGGAGCTGGAAAAACTTACACAATGCTTGGTACAATGGAAAGCCCAGGAGTGATGGTGTTGGCAATTAAGGATCTCTTCGGTAAAATCAGGACGAGAAGTTGTGATGGAAACCATGTTGTTCATCTGTCCTATCTTGAGGTTTATAATGAAACCGTAAGAGATTTGATTTCACCTGGAAGACCTCTGGTTTTGAGAGAAGATAAACAGGGGATTGTGGCAGCAGGTCTTACACAATACCGAGCTTACTCCACTGATGAAGTAATGGCATTGCTTCAGCAAGGAAACCGTAACAGAACTACAGAACCAACTCGTGCAAATGAAACATCTTCACGTTCCCATGCTGTTTTGCAGGTTGTAGTTGAATACCGAGTTAGAGATGCTGCAATGAATATTGTTCACAAAGTGGGAAAGCTCTCATTGATCGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAAAGAACACTTAGATCTCTTGAGGGTGCCAACATTAACCGGTCACTTCTTGCATTAAGCAGCTGCATCAATGCTCTTGTAGAGGGCAAGAAGCACATTCCTTACCGAAATTCAAAACTTACTCAGCTTCTCAAAGATTCATTAGGAGGAACTTGCAACACTGTCATGATTGCAAACATAAGCCCGAGTAACCTTTCATTTGGTGAAACTCAAAACACCCTTCATTGGGCTGATAGAGCCAAGGAGATTCGAACAAAGGCAACTGATGCAGAGGATCTATTACCGATACCTGGAACAGAAATAGACCAGGCCAAGCTGGTACTTGAGCTGCAAAAGGAGAATCGTGAATTGCGAATGCATCTAGCAtgcaaacaacaaaaaatcgTGAAACTCCAAGCACAGTCCTTGGCAGCATATTCTTCCCCAACACCACCATCAGCTTCATCTTTTCTTTCCACTCCCCCGACTTCAGTTCAACCAAATGAAAAACGAAGGGCTGGACGCTCTTTATTAACTGCAACTTATCTTACTCCAGAGAACATGAACAAGGGAGAGGAGATAGCTATCACTGTCAGAACACTTTATCAAAAAGTGAAAGCCCTGGAGTCAGAGATAGAGAGAATGAAAAAGGACCACAGTTTGCAGATAAAGCAGAAAGATGACGTTATTCGTGAGCTTTCACAAAAAGGTGGGAGAAAAGTAGTGGCACCAGGGGAAGTAGGGAAGAGAGTGGTAACCAGGTCTAGCATACGGCCAAAGAATGAAAACACAGGTGAGTTAAAGAGTCCAAGTCATCGTTTTCGATCACCACTACCAATGGCCAAGAAACGAAGCTTTTGGGACATAACTGCTGCTAATAGCCCATCAGTTGCTGCATTAAATGGGAGAAAAACAAGAAGCCATGTCATTTCTGAACCTACTGCAAATCCATCCATGCTTCTTCAGCCAGGTTTTACTCGTCAAAAGGGAAATATTTGGAAGTGA 1971 0.4201 MTVSTRSHTKNNANPNQQQQQQPHQGLKEKLKALTLLYEQHNLKNRSFNPEQEENHKENVKINVVAARKKLSLVETEKNGNRIMVFVRVRPIGKKEKEAGSRCCVKTVNRRDVYLTEFASPEDYLRLKRIRSGHFTFDACFPDSATQQEVYSTSTSELVEAVLQGKNGTVFCYGATGAGKTYTMLGTMESPGVMVLAIKDLFGKIRTRSCDGNHVVHLSYLEVYNETVRDLISPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNRNRTTEPTRANETSSRSHAVLQVVVEYRVRDAAMNIVHKVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSNLSFGETQNTLHWADRAKEIRTKATDAEDLLPIPGTEIDQAKLVLELQKENRELRMHLACKQQKIVKLQAQSLAAYSSPTPPSASSFLSTPPTSVQPNEKRRAGRSLLTATYLTPENMNKGEEIAITVRTLYQKVKALESEIERMKKDHSLQIKQKDDVIRELSQKGGRKVVAPGEVGKRVVTRSSIRPKNENTGELKSPSHRFRSPLPMAKKRSFWDITAANSPSVAALNGRKTRSHVISEPTANPSMLLQPGFTRQKGNIWK 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01785 656 MobiDBLite consensus disorder prediction 469 492 - -
Tsu06g01785 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 454 IPR027417 -
Tsu06g01785 656 Gene3D Kinesin motor domain 73 418 IPR036961 -
Tsu06g01785 656 Coils Coil 520 547 - -
Tsu06g01785 656 Coils Coil 24 44 - -
Tsu06g01785 656 Pfam Kinesin motor domain 88 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 MobiDBLite consensus disorder prediction 469 495 - -
Tsu06g01785 656 PRINTS Kinesin heavy chain signature 165 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 PRINTS Kinesin heavy chain signature 362 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 PRINTS Kinesin heavy chain signature 313 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 PRINTS Kinesin heavy chain signature 279 296 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 ProSitePatterns Kinesin motor domain signature. 312 323 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu06g01785 656 PANTHER KINESIN-RELATED 59 647 IPR027640 GO:0003777|GO:0007018
Tsu06g01785 656 Coils Coil 436 463 - -
Tsu06g01785 656 SMART kinesin_4 80 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 MobiDBLite consensus disorder prediction 1 26 - -
Tsu06g01785 656 MobiDBLite consensus disorder prediction 1 27 - -
Tsu06g01785 656 MobiDBLite consensus disorder prediction 578 599 - -
Tsu06g01785 656 ProSiteProfiles Kinesin motor domain profile. 82 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu06g01785 656 PANTHER KINESIN-LIKE PROTEIN 59 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01785 Tsu-Chr6 20736812 20741693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01785 81 450 Miscellaneous Gene Families AT4G39050 36.290 1.25e-57 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01785 K10401 - gmx:100815524 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01785 06 20736812 20741693 Tsu06g01785 06 20736812 20741693 ECH