Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01376 ATGGATCAAATTGGAAGCATTACTCACTTTCTTCAAGATAAGAATGTTTTGGTTCTTGGTGCCACTGGTTTCCTTGCAAAAATATTTATTGAGAAGATACTGCGAGTTCAACCAAATGTGAAAAAACTTTATCTTCTTTTGAGAGCTACAGATGCTGAATCTGCCACTAGAAGAATGCAGAATGAGATTTTACGGAAGGACTTGTTCAGACTACTGAAGGAAAACCTTGGTGCAAAGTTCAATAGCTTTATCTCAGACAAGTTAACTGTAGTGCCTGGAGACATTTCCCAAGAAGACCTCAATTTGAAAGACTCGAATCTACTTAAAGAGTTATACGACCAAACTAATGTCATTGTGAATTTAGCTGCAACAACTAACTTCGATGAAAGATATGATGTTGCATTGGGTTTAAATACATTTGGAGTTAAGCATGTCTTAAACTTCGCCAAAAATTGTATTAACCTTAGGGTGCTTGTCCATGTATCCACAGCATACGTATGTGGAGAGAGAGGAGGATTGATAGTTGAGGATCCATACCAATTGGGTGCATCACTAAATGGAGTGGAAGGACTAGACATCGACGTGGAAATGAAAGTTGTTGAGGAGAAATTGAACATGCTACGACAAGAGGAAGCTACTCAAAATGATATTAAAATTGCAATGAAGGACTTGGGTATGAAAAGaGCAAATTTGTATGGATGGCCAAACACATACGTCTTTACCAAGGCAATGGGTGAAATGCTTGTGGGGACTATGAAGGAAAATATATCAACTGTGATTGTGCGTCCTACAATCATTACCAGCACTTATAAAGAACCTTTCCCTGGTTGGGTTGAAGGAGTCAGAACTATAGACAGTTTAATTGTTGCTTATGGCAAAGGAAAATTAACATGCTTCCTTGCCGACCTTGAGGCAGTTTTTGATGTGATTCCTGCTGACATGGTGGTGAATGCAATGTTAGTGGCCATGGTGAGCCATGCAAATCAACCTTGTGATAGCATATATCATGTGGGTTCCTCTGTTGGGAATCCAGTTAGATATCTAAATTTCAAAGATTATAGCTTCAGATATTTTACTGCAAAACCATGTTTAGATAAGGAAGGAAAAGCCATCAAGGTTGGCAAAGTTACTGTATTGGAAAACATGAATAGCTTTCAAAGATACATGTACATTCGATACTTGCTTCCATTACAGGGGCTAAAGCTAGTCAATGAAGCTTTTTGTCAGTATTTTCAGGGCATATATTTTGATATCAGCAGGAAGGTTCATACTATGATGCGCTTGGTTGACCTCTACAGACCCTATTTGTTCTTTGATGGCGTGTTTGATAATTTGAATGCAGAGAAGTTGCAAATAGCAGCAAAACAAAGTGGAGTAGAGATGGATTTGTTTTACTTTGATCCAAAAATGATTGACTGGGAGGACTACTTCATGAACATCCACATTCCTGGCATTGTTAAATATTCCATCAAGTGA 1476 0.3814 MDQIGSITHFLQDKNVLVLGATGFLAKIFIEKILRVQPNVKKLYLLLRATDAESATRRMQNEILRKDLFRLLKENLGAKFNSFISDKLTVVPGDISQEDLNLKDSNLLKELYDQTNVIVNLAATTNFDERYDVALGLNTFGVKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLGASLNGVEGLDIDVEMKVVEEKLNMLRQEEATQNDIKIAMKDLGMKRANLYGWPNTYVFTKAMGEMLVGTMKENISTVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLEAVFDVIPADMVVNAMLVAMVSHANQPCDSIYHVGSSVGNPVRYLNFKDYSFRYFTAKPCLDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLQGLKLVNEAFCQYFQGIYFDISRKVHTMMRLVDLYRPYLFFDGVFDNLNAEKLQIAAKQSGVEMDLFYFDPKMIDWEDYFMNIHIPGIVKYSIK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01376 491 Gene3D - 8 385 - -
Tsu06g01376 491 CDD FAR_C 391 488 IPR033640 -
Tsu06g01376 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 490 IPR026055 GO:0080019
Tsu06g01376 491 PANTHER FATTY ACYL-COA REDUCTASE 3 490 - -
Tsu06g01376 491 CDD FAR-N_SDR_e 14 362 - -
Tsu06g01376 491 Pfam Male sterility protein 392 491 IPR033640 -
Tsu06g01376 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 339 IPR036291 -
Tsu06g01376 491 Pfam Male sterility protein 20 319 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01376 Tsu-Chr6 12920912 12927639 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01376 114 488 Acyl Lipid Metabolism Gene Families AT4G33790 59.733 1.38e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01376 K13356 - gmx:100788994 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01376 06 12920912 12927639 Tsu06g01376 06 12920912 12927639 ECH
Tsu02g04701 02 56143838 56153295 Tsu06g01376 06 12920912 12927639 PCT