Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01359 ATGCCTAAATCTTCTGAACAAAAAGATGGATCTGAAACAGAAACACCAAATTTTTGTTGCATCGATTCATTCACTCATTTAGCTTCATCAACCAAATCTAAGAACAATACTTTTCCGATGAAACGCACCGTTCGTCCTTtcttcattcttctcattctTCTCGTTTTCGTTGCTACGTTAACCTCACGCGCTATTCTTCGTAAAGGTATACTCTCAATCGAGCTTGAAACGCGTGTTTTCACTCGCGATCCACCGTCGTTAAACTCCACTTTGCTTAAATACGCCGCCGTTGAGATCGGCGAGGAAAAATCCCGGCAAGAGATTCAGCAGCTTCTTGATGGTAACTTTGCTAGTCAAGCACGGCATAGGACATTCGTTTCGTGGCGGAGATTCATCCACCATGATGGTGGTGATAGAAATTTACCGGCAACACTCCGGTCGCCGCTTTTCTATCGGTATTGGCTTGATTTTCGGCGAGTTTTGCATGATTGGGCGAGGAAACGTCGGTTTCAACCAGGGATAATGTCGGAATTAACTCGATCGGTGAAAGTTCCGCTCGATCGGTATAACAAAGTTAATACCAATGCTGTTGATTCTGGTGAAAAGAAGTACTCTTCTTGTGCTGTTGTTGGTAATAGTGGAATTTTGCTTAATAGAAACTATGGTTCATTAATTGATGCACATGAATTTGTTATAAGATTAAACAATGCTAGGGTTGATAACTATGAATCAAAAGTTGGTAAAAAAACAAGTATTTCATTTGTGAATAGCAACATTTTGCATTTATGTGCAAGAAGATCAGGGTGTTTTTGTCACCCTTATGGTCCTAATGTTCCTATTGTTATGTACATTTGTCAAGCTGTGCATTTCTTGGATTATACTGTTTGTAATGCTTCACACAAGTCTCCATTGTTGGTTACAGATCCTAGGTTTGATGTATTGTGTTCTAGGATTGTGAAGTATTACTCATTGAAAAGATTTGTGGAGGAAACAGGGAAGAGTTTGGAACAATGGAGTTCAGCTCATGATGGTGCTTTGTTTCATTATTCTTCTGCTGAATATGCTTTTTATAGTGATCTTGTTGATGGACGTAAGCCTATACCGTTTATATCGGAGAAGTTTAAGATTCCTCCTGTTGTAATGTATAGATGA 1152 0.3872 MPKSSEQKDGSETETPNFCCIDSFTHLASSTKSKNNTFPMKRTVRPFFILLILLVFVATLTSRAILRKGILSIELETRVFTRDPPSLNSTLLKYAAVEIGEEKSRQEIQQLLDGNFASQARHRTFVSWRRFIHHDGGDRNLPATLRSPLFYRYWLDFRRVLHDWARKRRFQPGIMSELTRSVKVPLDRYNKVNTNAVDSGEKKYSSCAVVGNSGILLNRNYGSLIDAHEFVIRLNNARVDNYESKVGKKTSISFVNSNILHLCARRSGCFCHPYGPNVPIVMYICQAVHFLDYTVCNASHKSPLLVTDPRFDVLCSRIVKYYSLKRFVEETGKSLEQWSSAHDGALFHYSSAEYAFYSDLVDGRKPIPFISEKFKIPPVVMYR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01359 383 Gene3D Glycosyl transferase family 29 148 352 IPR038578 -
Tsu06g01359 383 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 352 383 - -
Tsu06g01359 383 Pfam Glycosyltransferase family 29 (sialyltransferase) 193 284 IPR001675 GO:0006486|GO:0008373
Tsu06g01359 383 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 39 351 - -
Tsu06g01359 383 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 352 383 - -
Tsu06g01359 383 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 39 351 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01359 202 256 Glycosyltransferase AT3G48820 40.000 4.90e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01359 K00786 - gmx:100789506 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01359 06 12777432 12778715 Tsu06g01359 06 12777432 12778715 ECH