Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01356 ATGATTTCAAAAGCAGCAATAGTGTTATTCATAGGTCTTGTAGGAATGGCTTATCAAGCAACTCAACTTCCACCTCCAAATCATAATGAATCACTTCTTGATCAAAATTATGTTGAAGTTTCAACAAGAATTAAACTCAATGATGGAAGATATCTTGCTTATAGAGAAACTGGTGTTACAAAGGATAAAGCAAAACATAGTATCATTGTTGTTCATGGATTTGGAAGCTCTAAAGATATGAACTTTCCTGCATCTCAAGAACTAATAGATGAATTGGGAGTATATATTCTGCACTATGATAGAGCAGGATATGGACAAAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACATGACATTGAAGAACTAGCTGATCAGTTACATATTGGATCAAAATTTCATGTGATTGGAGTTTCAATGGGATCATATGCTACCTGGAGTTGTCTCAACTATATCCCTAACAGGCTAGCTGGTGTGGCTATGATAGCACCAACTATCAACTATGAATGGCCTTCCCTTCCTAAGAGTCTTGTAAAGGATGACTACAGAAAGAGACTTGTCAAGGTGGCAATCTGGCTTGCGAAATATTTTCCTAAACTGTTACACTGGTGGGTGAGTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAATCCAGCATTCTTCAACAAAAGAGATATAGAAATTTTAGAGAGAATTCCTGGGTTTCCAATGCTTACTAAGGATAACTTGAGGCACAAGGTTGTTTTTGACACACTCAGGGGTGATTGGATGATTGCCTTTGGAAATTGGGAATTTGATCCAATAAAGCTTAGTAATCCATTCCCTCACAGTAACAAAAGTTCAGTTCACATTTGGCAGGGCTATGAAGATAAAGTAGTGCCCTCTCAAATTCAAAGATTCATTTCAGAGAAGCTACCATGGATACAATATCATGAAGTTGTAGATGGTGGCCATTTGATTGTACATTATAGTGGCTTAGGCGAGGCGATTTTGAAGGCACTTTTACTTGGGGAAGAAGATATTTCATATAAACCTAGATCATCAAAATCTAAGGTTTGTTCGTATCAGGTACTACAGCAGAATGTTGCTCGTGCATGCTGCTACTACAATACAAAGTCGCACGCTAAAGTCGCAAAACAACAGctgcgtgtgtgtgtgtgtgacttTGATCTCAACTTGACTTTTCTTCCATTCAATTCAATCCAGCAACTTGGCTTAATGTTGAGTTCTGGGAGTAACTTAAACAGCAACATCAGCACCACAAGTGGGATAACTTCATTGGATATGCCACCGTTGCCCCAGTGTTTGCCGCTAGATTCGATCACGGTAGGAAACCAAAAATATACAGGTGAGCTAAGGAGGGTTCTAGGTGTTTCTGCTGGAAATACTTCAGAAGACCAATCTTTTGGAGTTCCACATCCTAAATCAATGGGCCCAGGGTCCTCAGGAGAGTTAAAACACTTAAAAGAAACTGTTCAAGATGGCTCCAGAAAGGCTAGGGATAGATCAAAAATGTTTCGTGAATCTATATCTAAACTGGATAGGTATAGAGAGGCCTTAAACTCAAAGAAGAGGCAAAGGAGCGATTTATCAAGTGAAAGGGGAAGTGGAGTAAACTTAACAAAGATGGGTAACCAGATTCACAAAATCCCGAATGATAATATGATTCAGAGAGAAGTCAAGACCTCAAATTCAATGCTGAGCAAGCGAATTCGTACGTCAGTGGGAGACACACGGGAGGATAGTAGGTCTGCTGATATTGGAAGACAACCGATGCTCACTGAAAAGGACGGAAATCTGATTCAGGCACTTGGGGGGGACTCTGTTCGAAATGAAGAGAAAACTCGCAGATTACTTGCCGGAGGTGAGGGATTagatcaaaaaataaaaaagaagaggtCCGTTGGAACAGTAGGAAACAGAGTTATATCTGGTGAAAGGGACGTAAAACGAGTTACTTATCCAAAGGGAAATGCTGATTTGAAGATGCGATTTAATGATGCTCAGGGTTTCAGATTGAAACCACTTCCTGGATCAAGTGGGATCAATAAGTCTGAGGGCTCTTCAGAGCCTAATAATACAGGTGTGCGTGTGATGCTTACAGGTGAGCAAGGTATTACTCTTCACAGGGACCACACAGCTGACCAGAGAGTTGTAGCAAAAGGAAACAACAGATCAAGCACTCAGGAGGACCCAACAGGCACCACAAACACACCCATTAAAAACAAGGTATCCCGGGCACCAAGAACGGGTTCAGTTAGTGCACTAGAGTTGTCTAACAGTCAGTCTCCTTCTGGAAGTTTTCCAGGCTCTTCTATACATCCAATGACTCAGTGGGGTGGACAGAGACCACCTAAAAATTCACGCTCACGAAGAGTGAAAGTAGTTCCTCCCGCCTCACGCAACCTTGAAGTTCAGGTCTCATCTGAAGGCTGTCTGACTTCTGATTTCAATGTTAATAAAGTTTCTTCTGTTGGCAACAATGGGTTCCAACGGGCTAGCAGTGCAGACAACAGTACACCGAAATATAAACGACAGCCTGATGATATTTCGTCTCCCTTTGGATTATCTGAAAGTGAAGAGTCTGGTGCTggggaaaacaaaataaaagagaaaggCGTGAATGGCAGTGACATTGCTATGATTGCAGATAAGGATGGAACTCCTATGTTACAAATGAGGAAGAATAAACTACCAACAGATGAATTAGGAGATGGTGTACAGAGACAGGGAAGAACTGGAAGGAATTTATCGTCAATAAAACCAGGCCTTCCGTTAGGGAGGGAGAAGTCTGAGAATGTACCTATACTGAAGCCGCCAGTACAGGACACAAGGCCTAATGATAAGAATAAAGCCAAATATGGGCGCCCTCCTtcaaaaaaacagaaagaacGCAAGGTTTTGACTCGTGTAGGGAAGCAACTGAACATCAGTTCTTCTGATTTTGGAGGTGAATCTGATGATGATCGTGAAGAATTGTATAAAGCTGCTAATGGTGCTCTTAATGCTAGCAATCTTGCTTCAGGTCCATTTTGGAGTAAAATGGAGTATATTTTTGCTTCCATCAGCTTGGATGATGCATCTTTCGTGAAGCAACAGCTCAATATTGCTGACAATTTGGAAAAGAGTTTATCTCATATGTTTGCCATTGATCATGATATGTTGGGTGTTGttataaataacaaaacaacTCAAGGTTCAGAGGATAGAAGGAGAAGTCACTTTGATGAAGAATCAGCCAAGTTTGAGGCTGTAGGTGGGAGGAGTGACATGGAAAGACCGGACAAGGGTACCCCATTATTCCAAAGACTTCTCTGTGCTCTAATTGATGAAGACGACAATGAAGAATCATACCACCAAAGCGAAGCAAAGAATATATCTAGACAGTGTGCTAGTGATGATTCTCACTGTGGTTCTTGTAATCAAGTTGATTTTGAACCCAAAGACCGGGATAGAATGGAATCTGAAGTTGAATCGCAGGTGGATCTCCAAATTCAGAAGAATTGTATATTGGACAGACTATCTTGTGATAAGAGTACCACATCCAACACATTTAGGTACCCAAACACATCCAGTTCTTCACAAAGCACAGGAGTTTGGCAGGGAGATGAAGAATTTTGCCTTTCTGATATCACTCACACCAGTGAAATATGTTCAAATGATCTTGATCAACTACACCCTGAATTAAGTAATCCTAGCTTTGCTTCTCCTGATGGTGAGTATCAGCTGATGTCTCTGGATGACAGACTGCTGCTTGAGTTGCAGAGCATTGGTATATATCCAGAAATATTGCCTGATTTAGCTGAGGAAGATGAAGCTATAATTCAAGACATTGTGAAACTTGAGAAAACTCTATATGAACAGAATGGAAGGAAGAAGAGCAACTTGGACACAATTGATAGAGCTATTCTAGAAGGGAGGGACATTGAAAAACGGAAGATTGAGCAAGCTGCATTTGACCAACTTACTGAAATGGCTTACAGAAAGAGATTGGCATGCCGTGGAACCAGAAATTCAAAAAGTGCCGTTCAAAAGGTTTCAAAACAAGTTGCTCAGGCTTTTCTTAAACGTACTCTTGGAAGATGTAGAAGATATGAAGAAGCTGGTGTTAGCTGCTTTAGTGAACCTACTCTGCAAAATATTATGTTTGCCCCTCATTCACGTGAGAACGGTGGACAGCCTGCAGATTGCATTGTCTCTGGCACAGCCAGTAATACATGTAATAAAGCTTTGCAtcaaattgaaaccagaaaattagGTGCAGTTTCGAGTGCTTCTGAGAAATATGATGCAAACAGGGGACTGGTTGATTCATTTCAAGGTTCTATCCACTCATCAGAACAAATGTCATCAAAGAATGGGTCTGTGATGATCAAGGAGAAGAAGAGGGAAATGCTGGTCAATGGCTCTTCAAGAACATCAAATCTTGATGGCGCTGTTCATGGTGGAGTGAGGGGAAAGAGAAGTGAGAGGGATAGAAATCAGATCCGGGATCAGATCAGACAAAATTCTAATTCCAGAGCTGGTTGCCCATCTTTGGACAGTAGCCAAAATGAAAACAAGCCAAAAGCCAAGGCCAAGCAAAAGAGTACTTCGGGTGGACATGATAGGTTCATGGAAGCAAAGGAATCTGCATGTTTACCTATTTATGATTCTAGTCTATCTGTGGCTAATGCAAGCAACAATGGTAGAAAAGATAGGACAACATTATCTGTTAACCCGGACATTTCTCAAGTAAAGGAATCCGTTGACTTGGGGAGTTTGCCACTACCTGATTTAAGTTCAATAGACGAATTTGGTGTATCTGGTGAACTTGATGGGCCGCAAGATCTTGGTTCTTGGTTGAactttgatgatgatggtttgcAAGACAATGATTGTATTATGGGCCTTGAAATTCCAATGGATGACCTATCAGCGTTGGATATGCTTATGTGA 4950 0.4 MISKAAIVLFIGLVGMAYQATQLPPPNHNESLLDQNYVEVSTRIKLNDGRYLAYRETGVTKDKAKHSIIVVHGFGSSKDMNFPASQELIDELGVYILHYDRAGYGQSDPNPKRSLKSEAHDIEELADQLHIGSKFHVIGVSMGSYATWSCLNYIPNRLAGVAMIAPTINYEWPSLPKSLVKDDYRKRLVKVAIWLAKYFPKLLHWWVSQKWLPSNSVIEKNPAFFNKRDIEILERIPGFPMLTKDNLRHKVVFDTLRGDWMIAFGNWEFDPIKLSNPFPHSNKSSVHIWQGYEDKVVPSQIQRFISEKLPWIQYHEVVDGGHLIVHYSGLGEAILKALLLGEEDISYKPRSSKSKVCSYQVLQQNVARACCYYNTKSHAKVAKQQLRVCVCDFDLNLTFLPFNSIQQLGLMLSSGSNLNSNISTTSGITSLDMPPLPQCLPLDSITVGNQKYTGELRRVLGVSAGNTSEDQSFGVPHPKSMGPGSSGELKHLKETVQDGSRKARDRSKMFRESISKLDRYREALNSKKRQRSDLSSERGSGVNLTKMGNQIHKIPNDNMIQREVKTSNSMLSKRIRTSVGDTREDSRSADIGRQPMLTEKDGNLIQALGGDSVRNEEKTRRLLAGGEGLDQKIKKKRSVGTVGNRVISGERDVKRVTYPKGNADLKMRFNDAQGFRLKPLPGSSGINKSEGSSEPNNTGVRVMLTGEQGITLHRDHTADQRVVAKGNNRSSTQEDPTGTTNTPIKNKVSRAPRTGSVSALELSNSQSPSGSFPGSSIHPMTQWGGQRPPKNSRSRRVKVVPPASRNLEVQVSSEGCLTSDFNVNKVSSVGNNGFQRASSADNSTPKYKRQPDDISSPFGLSESEESGAGENKIKEKGVNGSDIAMIADKDGTPMLQMRKNKLPTDELGDGVQRQGRTGRNLSSIKPGLPLGREKSENVPILKPPVQDTRPNDKNKAKYGRPPSKKQKERKVLTRVGKQLNISSSDFGGESDDDREELYKAANGALNASNLASGPFWSKMEYIFASISLDDASFVKQQLNIADNLEKSLSHMFAIDHDMLGVVINNKTTQGSEDRRRSHFDEESAKFEAVGGRSDMERPDKGTPLFQRLLCALIDEDDNEESYHQSEAKNISRQCASDDSHCGSCNQVDFEPKDRDRMESEVESQVDLQIQKNCILDRLSCDKSTTSNTFRYPNTSSSSQSTGVWQGDEEFCLSDITHTSEICSNDLDQLHPELSNPSFASPDGEYQLMSLDDRLLLELQSIGIYPEILPDLAEEDEAIIQDIVKLEKTLYEQNGRKKSNLDTIDRAILEGRDIEKRKIEQAAFDQLTEMAYRKRLACRGTRNSKSAVQKVSKQVAQAFLKRTLGRCRRYEEAGVSCFSEPTLQNIMFAPHSRENGGQPADCIVSGTASNTCNKALHQIETRKLGAVSSASEKYDANRGLVDSFQGSIHSSEQMSSKNGSVMIKEKKREMLVNGSSRTSNLDGAVHGGVRGKRSERDRNQIRDQIRQNSNSRAGCPSLDSSQNENKPKAKAKQKSTSGGHDRFMEAKESACLPIYDSSLSVANASNNGRKDRTTLSVNPDISQVKESVDLGSLPLPDLSSIDEFGVSGELDGPQDLGSWLNFDDDGLQDNDCIMGLEIPMDDLSALDMLM 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01356 1649 Pfam Serine aminopeptidase, S33 63 252 IPR022742 -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 495 514 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 1524 1540 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 830 845 - -
Tsu06g01356 1649 SUPERFAMILY alpha/beta-Hydrolases 41 325 IPR029058 -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 1503 1523 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 948 973 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 685 704 - -
Tsu06g01356 1649 PANTHER SPECTRIN BETA CHAIN, BRAIN 411 1649 - -
Tsu06g01356 1649 PANTHER OS05G0107300 PROTEIN 411 1649 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 830 882 - -
Tsu06g01356 1649 Coils Coil 517 537 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 676 803 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 521 535 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 467 490 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 1487 1502 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 1471 1540 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 521 543 - -
Tsu06g01356 1649 Gene3D alpha/beta hydrolase 33 328 IPR029058 -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 723 789 - -
Tsu06g01356 1649 MobiDBLite consensus disorder prediction 899 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01356 Tsu-Chr6 12739928 12753897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01356 - - mtr:MTR_4g053240 1937.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01356 06 12739928 12753897 Tsu06g01356 06 12739928 12753897 ECH
Tsu02g04709 02 56246088 56248449 Tsu06g01356 06 12739928 12753897 PCT