Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01354 ATGATGGAGCATCTTCCTGTTGAAGTCATTGGGAACATATTGTCCCATCTTAAGGCTGCAAGAGATGTAGTAATTGCCTCAGCAACATGCAAAAAATGGCGAATTGCGTGTTGTAAACATCTCCACACAATCTCATTTAGTTCGAACGATTGGTCTGTTTATCGCGATATGACAACGACCCGTCTCGAGATTTTGATTACACAGACAATTTTTCAGACTTCAGGGTTGCAGTCCCTTTCCATTTTGATGGAAGATGTTGATGAGTTTTCGGCTTCTGCTGTTATTGCTTGGCTTATGTATACCAGAGAAACTTTGAGGCGGTTGTTTTATAATGTGAAGACTATGCCTAATGTTAATATTCTTGAGATATGTGGTAGGCATAAGATGGAGATACTTGATTTGGCTCATAATTCTATTGTTGGGGTTGAGCCTAATTATCAGAGGTTTCCTTGTTTGAAATCTCTTTCTTTGAGTTATGTTAGTATATCTGCATTGGATTTGAATCTTTTGGTGTCTGCGTGTCCGAGGATTGAGGTTTTGGAGCTTGTTAATCCGGAGATTGCAATGTCTGATGCGCAGGTGAGTGTTGAATTGAGTAGTTCGACGCTGAAGAGTGTTTATGTTGAAGCAATAAGTTTGGATAAGTTTATATTGGAGGCTGATGGGATTGAGTGTCTGCATTTGAAAGATTGTGCGCTTGAGGATTTTGAACTAATTGGTAAGGGGACTTTGAAGAACTTCAGGATTGACGATGTTAGTGTTATACATCTTGATATTGGTGAGATTGTTGAGAATCTCGAGAGTGTGGATATCAGCAACTTCACAATTATATGGCCAAAATTTTACCAGATGATTTCGAGATCGTCGAATTTGAAGAGGCTTAGGCTTTGGGATGTGATGTTTGATGATGAGGATGAGGTCGTGGATTTGGAAACTATTGCTACTTGCTTTCCACACCTGACTCATTTATCGCTGAGTTATGATGTGAGAGATGGAGTTCTTCATTATAGTTTACAAGGATCTTCTTATCTGGAAAATGTCATTGTCTTGGAGCTTGGGTGGAATGTGATTAATGATCTTTTCTCCCAGTGGGTTGAGGGGCTGCTTAAGCGATGTCCTATTCTCAAGAAACTAGTCATTCACGGTGTTGTTTCTGAGGCGAAGACTGATGAAGAATGCAAGATGTTAGCCAATTTCACTACATCCATGGTTGAGCTGATGAGGAGATACACAGATGTTGATCcacattttaaatttgaatag 1263 0.3927 MMEHLPVEVIGNILSHLKAARDVVIASATCKKWRIACCKHLHTISFSSNDWSVYRDMTTTRLEILITQTIFQTSGLQSLSILMEDVDEFSASAVIAWLMYTRETLRRLFYNVKTMPNVNILEICGRHKMEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVSACPRIEVLELVNPEIAMSDAQVSVELSSSTLKSVYVEAISLDKFILEADGIECLHLKDCALEDFELIGKGTLKNFRIDDVSVIHLDIGEIVENLESVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPHLTHLSLSYDVRDGVLHYSLQGSSYLENVIVLELGWNVINDLFSQWVEGLLKRCPILKKLVIHGVVSEAKTDEECKMLANFTTSMVELMRRYTDVDPHFKFE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01354 420 PANTHER - 2 418 - -
Tsu06g01354 420 Gene3D - 1 48 - -
Tsu06g01354 420 Pfam F-box-like 3 40 IPR001810 GO:0005515
Tsu06g01354 420 SUPERFAMILY F-box domain 2 45 IPR036047 GO:0005515
Tsu06g01354 420 Gene3D Ribonuclease Inhibitor 111 413 IPR032675 -
Tsu06g01354 420 SMART fbox_2 5 46 IPR001810 GO:0005515
Tsu06g01354 420 SUPERFAMILY RNI-like 37 383 - -
Tsu06g01354 420 PANTHER F-BOX PROTEIN-LIKE 2 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01354 Tsu-Chr6 12721444 12723989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01354 - - gmx:100804357 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01354 06 12721444 12723989 Tsu06g01354 06 12721444 12723989 ECH