Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01353 ATGGCTATGGCTAAACCCCATCACCTCATTCTCCTTCTCCTTCTCTTCTTCACCACTCTacattcttcttctccttcaccCTCAAATCACATCTACAACGTTGCTGATAATGTCCCATTTTTCGTCAACAAACTAGGACCCTTCAACAATCCCAGTGAAACATATGAATACTATGAATTACCATTCTGCAATCCAGACCCAAttgtgaaaaagaaagaatccCTTGGTGAAGTACTCAATGGCGATCGTTTAAGCAATGGTTTGTATGAGTTTAAGTTTAGGGAAGATAAGATTGATGAAACATTGTGTCAGAAGAAACTTACAATTAATGAAATTGGAAGCTTTAAGGAAGCTATAAATAGTGAATTTTACTTCCAGTTTTATTTGGATGATCTTCCATTTTGGGGGTTTATTGGGAAAGTTGAAGATCAAAGTTTGATTCATGGTGGGGGAGGATCGAATTATTACCTTTTTACGCATGTTCAATTTGATGTTCTTTATAATGGGAATCGAGTTGTAGAAGTTAAAGCATTTGGTGATCCGAATCGTGCTGTTGATATAACTAAAGATGTTGTCATTGATGTTAAGTTCACTTATTCTGTTATCTGGAAGGCCACTGAGCTTCGGTTTGAGAATAGGATGAAGAGATACTCGAGAGCTTCGTTGCATCCTATGTATCGTCAAGTTCATTGGTTCTCATTCATTAACTCCATTGTCATCATTTTGCTTTTGATCGGTTTGCTTTCCTTGCTATATACGAGACATTTGAAGAGTGAtttgaaaaagTATTCTAATGCAAATGAAGAAGATAGGGAGGTTGGTTGGAAGTCCATTCATGGTGATGTATTCAAACATCCTCCGAACTCGTCCTTATTTTTCGCTGTTGTTGGAACCGGTACCCAATTGCTAATCTTGCTTTGTTTTCTACTGTTTCTTGCATTTATTGGTACCCTCTATCCATACAATCGTGGCGGACTCTCAAATTGTCTCGTCCTTCTATTCACCCTTTCATCTGTTTTTGCTGGGTATTCAACAGCATCTTTCCATGGCCAATTTGCTGAGAATGGATGGGAGAGGAGTGTTGGTCTAGCAGGGATTCTTTACATTGGACCAGTGTTTGTTATATTCTCTATCCTCAACATTATTGCAATATCTTACAGGGTTACAGCTGGACTCCCATTGGGCTCCATTATTGTGATTCTTTGTTTATACGCATTTGTCGCAATCCCTTTACTTGCATTCGGTGGAGTAATTGGATACCGTCTTAGGTCTGTGTTTCAGCGCCCCTCTGCTACAAAGAGATATCCTAAAGAGATTCAACAGCTTCCTTGGTACAGGAGAACACCATTTCAAATGTTTATTGGAGGTTTTGTGCCTTTTAGTGCAATTGTCCTGCAATTACATCAGGTGTATGCTAGTATTTGGGGCTACAAAATATACACACTTCCTGGCATTTTGGTTGCCACACTCATCACCGTCATTGTGATTGTTGTGCTCGTAAATATTGGCTTGACGTACATTCAACTATCTGTCGAAGACCATGAATGGTGGTGGAGATCTGTGCTGTGTGGTGGTTCAACAGCCATCTTCATGTTTGGCTATGGTATCTACTTCTATGCAAGATCAAGAATGGGTGGATTCTTACAACTATCTTTCTTTATTGGCTACAATGCATGCATATGCTATGCTTTCTTCCTGATATTTGGTGCCATCAGTTTCCGAGTTTCGTTGCTATTTGTTCGCCATATATACCTCAATGTTAAAAGAGAGTGA 1773 0.383 MAMAKPHHLILLLLLFFTTLHSSSPSPSNHIYNVADNVPFFVNKLGPFNNPSETYEYYELPFCNPDPIVKKKESLGEVLNGDRLSNGLYEFKFREDKIDETLCQKKLTINEIGSFKEAINSEFYFQFYLDDLPFWGFIGKVEDQSLIHGGGGSNYYLFTHVQFDVLYNGNRVVEVKAFGDPNRAVDITKDVVIDVKFTYSVIWKATELRFENRMKRYSRASLHPMYRQVHWFSFINSIVIILLLIGLLSLLYTRHLKSDLKKYSNANEEDREVGWKSIHGDVFKHPPNSSLFFAVVGTGTQLLILLCFLLFLAFIGTLYPYNRGGLSNCLVLLFTLSSVFAGYSTASFHGQFAENGWERSVGLAGILYIGPVFVIFSILNIIAISYRVTAGLPLGSIIVILCLYAFVAIPLLAFGGVIGYRLRSVFQRPSATKRYPKEIQQLPWYRRTPFQMFIGGFVPFSAIVLQLHQVYASIWGYKIYTLPGILVATLITVIVIVVLVNIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYGIYFYARSRMGGFLQLSFFIGYNACICYAFFLIFGAISFRVSLLFVRHIYLNVKRE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01353 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 12 589 - -
Tsu06g01353 590 Pfam Endomembrane protein 70 54 544 IPR004240 GO:0016021
Tsu06g01353 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 12 589 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01353 Tsu-Chr6 12714668 12719823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01353 3 590 Miscellaneous Gene Families AT2G01970 47.892 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01353 K17085 - gmx:100818419 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01353 06 12714668 12719823 Tsu06g01353 06 12714668 12719823 ECH