Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01351 atggTTTGGCATTGTTGTTTTCCTATAAATCCCAAAACCCTCTATCGATCACTTTGTCTCACTCACTCACTTCGTGTTTTCCGCTTCCATCTCAAACCAtcttctctccctctctctctGGTGATCATGGCATCAATGACAGGTGTGAACGTTTCCTCCCTATGCATGTTTCAAACTGCAAGCCGCAATCAATCAACCAGTGCTACCACAGTGAAGTGTCCTTCCTCTTTCGGGTCGACAAAGAGTGTTTCAAGATCTTTTGGCTTGAAGTCATCCTCTTCATATAGAACAACTGCAATGGCCGCTTACAAGGTTAAGCTAATCGGACCAGATGGAAAAGAGAATGAGTTTGAAGCCCCTGATGATGTTTACATCTTAGATGCAGCAGAGAATGCTGGAGTTGAACTCCCTTATTCGTGCCGTGCTGGAGCATGCTCTACTTGTGCTGGAAAGATTGTTTCTGGTTCAGTGGATCAGTCCGATGGCTCGTTTTTGGATGACAATCAACTTAAGGAAGGCTTTGTGCTTACCTGTGTTTCCTATCCAACCGCAGACGTTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 594 0.4259 MVWHCCFPINPKTLYRSLCLTHSLRVFRFHLKPSSLPLSLVIMASMTGVNVSSLCMFQTASRNQSTSATTVKCPSSFGSTKSVSRSFGLKSSSSYRTTAMAAYKVKLIGPDGKENEFEAPDDVYILDAAENAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKEGFVLTCVSYPTADVVIETHKEGELY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01351 197 PANTHER FERREDOXIN 46 197 - -
Tsu06g01351 197 Pfam 2Fe-2S iron-sulfur cluster binding domain 110 183 IPR001041 GO:0051536
Tsu06g01351 197 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 140 148 IPR006058 GO:0051537
Tsu06g01351 197 PANTHER FERREDOXIN 46 197 - -
Tsu06g01351 197 SUPERFAMILY 2Fe-2S ferredoxin-like 96 196 IPR036010 GO:0051536
Tsu06g01351 197 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 101 197 IPR010241 GO:0009055|GO:0022900|GO:0051537
Tsu06g01351 197 Gene3D - 100 197 IPR012675 -
Tsu06g01351 197 CDD fer2 105 189 IPR001041 GO:0051536
Tsu06g01351 197 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 103 194 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01351 Tsu-Chr6 12696443 12699693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01351 K02639 - gmx:100785611 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01351 06 12696443 12699693 Tsu06g01351 06 12696443 12699693 ECH