Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01321 ATGAGAGAAATCTTCACTACACAAAAAGCAGAAAATACAGGGAGTATCATGTGGATTGAGCAAAATACCTCTATAGTACTGAAACATTGCCCTCGTAGGCTTGAAGGGAAGGTGGCTCTCATCACCGGTGGCGCGAGCGGCATTGGCGAGGCAACTGCAAGACTCTTCTCCAAGCATGGAGCTCAAGTCGTTATAGCTGATATTGAAGATGACATAGGTCACTCTGTTTGCAAAGATTTACAGAAATCCTCAGCTTCCTATGTTCATTGTGACgtgacaaaagaaaaagacattGAAAAAGCCGTGAACACAACTATTTCAAAGTACGGTAAACTAGACATCATGTTTAACAACGCTGGCATAACCGGTTCATACAAAACCAATAtacttgaaaataaattatccGAATTTCAAGAAGTGATTAACACTAACTTGATTGGTGTCTTTCTTGGAACAAAATACGCTTCAAGGGTAATGTTCCCCGCTCGACGGGGTAGCATAATTAACACAGCTAGTATTTGTGGAAGCATAGGCGGTGCTGCTTCGCACGCCTACACAAGTTCAAAACACGCAGTTGTGGGACTAATGAAAAACACAGCCATCGAGCTTGGATCGTTTGGCATTCGGGTGAATTGTGTGTCACCTTATGTCGTTCCCACTCCGTTAGCTAAGAATTTCTTTAAACTTGATGATGATGGGTGTTCAAGGGTTTATTCTAACCTAAAGGGTGCTAATCTTCTTCCAGAAGATGTGGCTAAAGCTGCTTTGTACTTGGGAAGTGACGACTCTAAGTATGTTAGTGGTCACAATCTTGTCGTAGATGGAGGATTCACAGCTCTTAACAATGGATTATGTGTGTTTAGGCAATCTGTTTGA 876 0.4064 MREIFTTQKAENTGSIMWIEQNTSIVLKHCPRRLEGKVALITGGASGIGEATARLFSKHGAQVVIADIEDDIGHSVCKDLQKSSASYVHCDVTKEKDIEKAVNTTISKYGKLDIMFNNAGITGSYKTNILENKLSEFQEVINTNLIGVFLGTKYASRVMFPARRGSIINTASICGSIGGAASHAYTSSKHAVVGLMKNTAIELGSFGIRVNCVSPYVVPTPLAKNFFKLDDDGCSRVYSNLKGANLLPEDVAKAALYLGSDDSKYVSGHNLVVDGGFTALNNGLCVFRQSV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01321 291 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 29 283 - -
Tsu06g01321 291 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 172 200 IPR020904 GO:0016491
Tsu06g01321 291 Gene3D - 26 287 - -
Tsu06g01321 291 Pfam Enoyl-(Acyl carrier protein) reductase 43 278 - -
Tsu06g01321 291 PANTHER MOMILACTONE A SYNTHASE 29 283 - -
Tsu06g01321 291 CDD secoisolariciresinol-DH_like_SDR_c 33 278 IPR045309 GO:0016616
Tsu06g01321 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 279 IPR036291 -
Tsu06g01321 291 PRINTS Glucose/ribitol dehydrogenase family signature 241 261 IPR002347 -
Tsu06g01321 291 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Tsu06g01321 291 PRINTS Glucose/ribitol dehydrogenase family signature 110 121 IPR002347 -
Tsu06g01321 291 PRINTS Glucose/ribitol dehydrogenase family signature 159 175 IPR002347 -
Tsu06g01321 291 PRINTS Glucose/ribitol dehydrogenase family signature 185 204 IPR002347 -
Tsu06g01321 291 PRINTS Glucose/ribitol dehydrogenase family signature 206 223 IPR002347 -
Tsu06g01321 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 110 121 IPR002347 -
Tsu06g01321 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 IPR002347 -
Tsu06g01321 291 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01321 Tsu-Chr6 12453845 12458444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01321 34 278 Acyl Lipid Metabolism Gene Families AT1G63380 33.852 3.78e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01321 - - gmx:100782627 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01321 06 12453845 12458444 Tsu06g01321 06 12453845 12458444 ECH