Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01297 ATgagaaaggaaaatgaaaagCGAGTTGTTATCTTAGGAGGCGGTGTTGCCGGTTCACTCGTCGCTAAATCTCTTCAATTTCATGCACATGTTACCCTTGTTGATCCGAAGGAGTATTTTGAGATTTCATGGGCAGGCTTGAGGGCAATGGTGGAGCCATCCTTTGCAGAAAGGACAGTGATAAACCATAGAGATTACTTCACAAAAGGTGATCTCGTTACATCCAGTGCTGTCAATGTGACGGAAACGGAAGTGTTGACTGCAGATGGTCATCAGATTGCGTATGACTATCTTGTTATTGCCACTGGTCATGCCGATCCTGTACCCAAACTTAGGGGCGAAAGACTTCAACAATATAAAGAAGaaaatgaaaagataaaatCTGCTCGTTCCATTCTGATTGTTGGAGGAGGTCCTACTGGTGTGGAACTTGCTGGAGAGATAGCTGTTGATTTTCCGGAGAAGAAGATTACTCTAGTGCACAAAGGACCAAGGCTGCTGGAATTCATAGGGGCAAAAGCTGCTGATAAGACTCTAAAATGGTTGAAATCTAAGAAGGTTGAGGTAAAACTAGAACAAGCAGTTGACTTAAACAGTACCATAGACGGAAACCGCAAGATATATAAAACTTCAGTTGGAGAGACCATTGAAGCAGATTGTCATTTCTTATGCACGGGAAAACCAATTGCTTCGGCATGGCTTAAGGAATCTGTCTTGAAAAATGATTTGGATGTTCAGGGAAGGATTATGGTAGATGAAAACTTGAGAGTCAAGGGCCGGAGCAACATTTTCGCAATTGGAGATATTACAGATATTGCAGAACTCAAGCAAGGGTTTTTGGCACAGAAGCAGGCGGGAGTGGTTGCGAAAAACACGCGGCTGATGATGGAGGGTAGTAAAGAATGTTGGAGGGAAACTTACAAACCACATCCAGCAATGGCACTAGTTTCACTAGGGAGGTATGATGCAGTGGCACAGTTCCCTTTCCTAACAATCAGTGGAAGAATACCTGGCTTCATCAAATCTGGAGATTTGTTTGTTGgtaaaacaagaaaacaaatggGGCTCAACCCTCATATTGTATAA 1086 0.4134 MRKENEKRVVILGGGVAGSLVAKSLQFHAHVTLVDPKEYFEISWAGLRAMVEPSFAERTVINHRDYFTKGDLVTSSAVNVTETEVLTADGHQIAYDYLVIATGHADPVPKLRGERLQQYKEENEKIKSARSILIVGGGPTGVELAGEIAVDFPEKKITLVHKGPRLLEFIGAKAADKTLKWLKSKKVEVKLEQAVDLNSTIDGNRKIYKTSVGETIEADCHFLCTGKPIASAWLKESVLKNDLDVQGRIMVDENLRVKGRSNIFAIGDITDIAELKQGFLAQKQAGVVAKNTRLMMEGSKECWRETYKPHPAMALVSLGRYDAVAQFPFLTISGRIPGFIKSGDLFVGKTRKQMGLNPHIV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01297 361 PANTHER APOPTOSIS-INDUCING FACTOR 1 6 360 - -
Tsu06g01297 361 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 6 360 - -
Tsu06g01297 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Tsu06g01297 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 113 - -
Tsu06g01297 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 131 149 - -
Tsu06g01297 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 270 - -
Tsu06g01297 361 Gene3D - 5 351 - -
Tsu06g01297 361 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 271 IPR023753 GO:0016491
Tsu06g01297 361 SUPERFAMILY FAD/NAD(P)-binding domain 2 271 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01297 Tsu-Chr6 12246699 12250523 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01297 K22745 - gmx:100813439 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01297 06 12246699 12250523 Tsu06g01297 06 12246699 12250523 ECH