Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01289 ATGGAGTCTCAAAACATGAACCAAGAGAAATCATGTGTGCTAGTTAGAGTATGGGAAAAGTTAAAGGCTTTGCCAAAGGCTCTTATGAAGAAGGTGTTATGCATTTGTAAGATGTCAAAAGAGATAGCACAAGATGATCCAAGAAAAGTGATTCATTCACTAAAAGTTGGACTTGCAATCTCTTTAGTGTCTCTATTTTACTACTATCAACCACTTTATGAAAATTTTGGCCTTTCAGCAATGTGGGCTGTGATGACTGTTGTTGTAGTTTTTGAGTACACAGTTGGAGCTACTTTAGGAAAAGGTTTGAATAGGACAATGGCAACATTGGTGGCTGGTGCTTTAGGTGTTGGTGCTCATTACTTAGCTAGTTTATCTGGAGAGACAGGAGAACCAATTTTAATTGGATTCTTTGTATTTTTGcaagcTGCAATAGCATCATTTATAAGGTTCTTTCCAAAAGTGAAAACAAGATATGATTATGggatgctaatatttatattaacaTTCTCTTTAATATCTGTATCTGGATTTCGTGATGATGAAGTATTAAAAATGGCTCATAAAAGATTATCCACCATTTTTCTTGGAGGTTCTGCTTGTGTTATGatttccatttttgtttgtCCTGTTTGGGCTGGTGAAGAGTTGCACTATTCCATTGCTCTCAAATTGGAAACACTTGGTGACTTCTTAGAAGCATTTGTAGGTGAATATTTCAAAACATCGAAGGAAGAAGCATCTAAAGATAAAAAGTCATTTCTTGAAGGTTATAAAAGCATTCTCAATTCTAAAAGTAATGATGAGTCTCTGgCCAATTTTGCAAGATGGGAACCAGGTCATGGAAAGTACAAATTTAATCATCCATGGAATCAATACCTTAAAATTGGTGCTCTTTCTCGCCAATGTGCTTATAGAATGGAAGCTCTTAACGAACAACTCAATTCTGACACTAAAGGATCACCCGAAATTCGTTGTACAATCCAAGAACTATGCACAGAAATGTGTTTAGAATCAAGCATGGCACTGAAACAATTGAGTATATCAatcaaaacaatgaaaatgaaatcttCGCCGGATACACACATTGCAAATGCAAAAGCCGCGGTGAAAAGCCTCAACTCATTGCTTCAATCAAATTTATGGAAAGAAAATGATCTTTTATTAGTAATTCCAGTTGTGACAGTGGCTTCATTACTAATTGACATTGTTGATTGCACAGAGGAAATAGCTGATTCTGTTAATGTTCTTGCTtcaattattcattttaataatttagatgatgatgatgatgaaaaagatgaaaaatccCCTAAAGAAGTGTCACAATCTCCAACATGTGAATGTGTTGAACCAGATCCTAAGATTGAGAACTCACATGTGGTTATTATAGTTGAGGATTCAATGTGTGATAAATGTAACAAAGTTTGA 1431 0.3277 MESQNMNQEKSCVLVRVWEKLKALPKALMKKVLCICKMSKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTMATLVAGALGVGAHYLASLSGETGEPILIGFFVFLQAAIASFIRFFPKVKTRYDYGMLIFILTFSLISVSGFRDDEVLKMAHKRLSTIFLGGSACVMISIFVCPVWAGEELHYSIALKLETLGDFLEAFVGEYFKTSKEEASKDKKSFLEGYKSILNSKSNDESLANFARWEPGHGKYKFNHPWNQYLKIGALSRQCAYRMEALNEQLNSDTKGSPEIRCTIQELCTEMCLESSMALKQLSISIKTMKMKSSPDTHIANAKAAVKSLNSLLQSNLWKENDLLLVIPVVTVASLLIDIVDCTEEIADSVNVLASIIHFNNLDDDDDEKDEKSPKEVSQSPTCECVEPDPKIENSHVVIIVEDSMCDKCNKV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01289 476 Pfam Aluminium activated malate transporter 41 418 IPR020966 GO:0015743
Tsu06g01289 476 MobiDBLite consensus disorder prediction 428 448 - -
Tsu06g01289 476 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 5 434 - -
Tsu06g01289 476 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 5 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01289 Tsu-Chr6 12190445 12193420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01289 29 467 Miscellaneous Gene Families AT2G27240 53.620 4.21e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01289 - - aprc:113859727 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01289 06 12190445 12193420 Tsu06g01289 06 12190445 12193420 ECH
Tsu02g04765 02 56786626 56788996 Tsu06g01289 06 12190445 12193420 PCT