Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01262 ATGACACTTACTCAAACCTTTacaattttctttctcttctttgctCTATACTGCGGTTTAGACCCATTTAACCACAGTCCTATATCAAATTTCCCTAATTTTGATGCTAAAAAGGTTGACATGCCACCATGGTCTCATGTTCCTAATGACAAAGATGAACACAATTTGTTGCAAAATTCAGAGATTAAATTCTTGAACCAAGTACAAGGACCTGAGAGTATTGTCTTTGATCCTCTTGGTCATGGTCCTTATACTGGTCTTGCTGATGGTAGAATTGTCTTCTGGAATGGACATTCTTGGATTGATTTTGCTTATACTTCACCAAACAGGTCATTATGTAATCCTCTCCCTATACAAGAAGCAACACCATTTAGTTATGTGAAGACTGAACATATCTGTGGAAGGCCTTTGGGACTAAGATTTCACAAGAAAACAGGTGAATTGTACATTGCAGATGCATATCTTGGACTAATGAAGGTAGGGCCCGAGGGCGGTTTAGCAACGTCTCTTGCAACTGAAGTTGAAGGGGTTCCTCTAAGGTTTCctaatgatgttgatgttgattcAGAAGGAAATGTTTATTTTACAGAAAGCAGTGCTATTTACCAGAGAAGGAATTTCATTCAGCTGGTATTTTCCGGGGATGATAGTGGCAAAGTTTTGAAATACAACCCTGAAACAAAGGAAACCACTGTTCTTGTTAGGAATATTCAATTCCCAAATGGCATTTCCTTAAGCAAAGATGGttccttctttgttttttgtgaAGGATCGATTGGCAGGTTACGTAAATACTGGCTAAAAGGAGAAAAAGCCGGCACTTCAGAGATCTTAGCAATCCTGCCTGGAGCTCCTGACAATGTGAGGGTGAATGAAGATGGTGATTTTTGGGTGGCACTTCATTGTAGAAGATCTATGTATGCATATCTTACTGGTTTATATCCATGGATAAGGAAAGCTATACTCAAGCTTCCTATACCAACAAAGtatcaatatttatttcaaattgGAGGGAAGCAACATGGAGTGATTGTTAAGTATAGTCCTGAAGGTAAATTGTTGCAGATATTGGAAGATAGTGAAGGAAAAGTTGTTAGAGCAGTGAGTGAAGTTGAGGAGAAAGATGGTCAACTTTGGATAGGAAGTGTTCTTATGCCTTTTATTGCAATTTATAAATTGTAA 1182 0.3604 MTLTQTFTIFFLFFALYCGLDPFNHSPISNFPNFDAKKVDMPPWSHVPNDKDEHNLLQNSEIKFLNQVQGPESIVFDPLGHGPYTGLADGRIVFWNGHSWIDFAYTSPNRSLCNPLPIQEATPFSYVKTEHICGRPLGLRFHKKTGELYIADAYLGLMKVGPEGGLATSLATEVEGVPLRFPNDVDVDSEGNVYFTESSAIYQRRNFIQLVFSGDDSGKVLKYNPETKETTVLVRNIQFPNGISLSKDGSFFVFCEGSIGRLRKYWLKGEKAGTSEILAILPGAPDNVRVNEDGDFWVALHCRRSMYAYLTGLYPWIRKAILKLPIPTKYQYLFQIGGKQHGVIVKYSPEGKLLQILEDSEGKVVRAVSEVEEKDGQLWIGSVLMPFIAIYKL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01262 393 Pfam Strictosidine synthase 183 270 IPR018119 GO:0009058|GO:0016844
Tsu06g01262 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 393 - -
Tsu06g01262 393 Gene3D - 54 393 IPR011042 -
Tsu06g01262 393 SUPERFAMILY Calcium-dependent phosphotriesterase 42 391 - -
Tsu06g01262 393 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 7 393 - -
Tsu06g01262 393 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01262 Tsu-Chr6 11857092 11860445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01262 - - gmx:100803331 654.825