Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01236 ATGGGTTACTCAAAACAATGTTTGTTCTTAGTGTTACTAGTTGCATGTGTTAGTGGAGAAGATCCATATAGATTTTATACTTGGAATGTTACTTATGGTGATATTTATCCACTTGGAGTTAAACAACAGGGGATATTGATAAATGGACAATTTCCAGGGCCACAGATTGAGTCAGTGACTAATGATAACTTGATTATCAATGTTTTCAATAGCTTGGATGAACCTTTTCTTATATCTTGGAATGGAGTGCAGCAGAGAAGAAACTCATGGCAAGATGGAGTATATGGTACAAATTGTCCAATCTCACCAGGACAGAACTTCACTTACATTCTTCAAGTAAAAGATCAAATTGGTAGCTATTTCTACTTTCCTTCCACTGCATTCCACAAAGCGGCGGGCGGTTACGGAGGTTTCAAAATTGCTAGTCGTTCCGTGATTCCTGTACCTTTTGATCCTCCATCAGGAGATTTCACCATATTGGCAGGAGATTGGTACAAGAGAAATCACACAGATTTAAGGGCTATTTTAGATAGTGGAAGTGACCTTCCTTTCCCCGATGGACTTATCATCAACGGCCACGGTTCCAATGCTTACACATTCTCAGTTGATCAAGGCAAGACTTACCGGTTTCGCATATCGAATGTGGGACTTACCACTTCGATAAATTTCAGAATCCAAGGGCATAAGATGAAGCTAGTTGAGGTGGAAGGAACTCACAGTCTTCAAAACACTTATGATTCACTTGACATTCATTTAGGACAGACTTATTCTGTATTAGTTACTGCTGATCAACCACCAAATGACTACTACATTGTTGTCACAACAAGATTCACCTCACAAGTTTTGAATGCTTCATCCATTCTTCATTACAGTAACTCAGCAGGAAGTGTTTCTGGTCCTTTCCCTGGTGGGCCAACAATTGAAGTTGATTGGTCCGTTGAACAAGCTCGATCTCTTagGAGGAATCTTACAGCAAGTGGGCCAAGACCAAATCCACAAGGATCTTACCATTATGGAATGATAAACACAACACGTACAATTAGACTTCAAAATACTGCTCCAATTATCAATGGAAAACAAAGATTTGCTGTAAACAGTGTGTCCTTTATCCCAGCTGATACACCACTTAAACTAGCTGATTACTTCAAGATTCAAGGAGTGTTTTCACTAGGAAGTATCTCAGACAACCCCACTGGTGGCGGCGGTTATCTTCAGACTTCTGTCATGGCGGCCGATTTCCGAGGTTTTTTAGAGGTTGTTTTTGAGAATCCTGAAGACACTTTGCAATCATGGCACATTGATGGACACAGCTTCTTTGTAGTTGGGATGGATGGAGGACAATGGTCAGCTGCAAGCAGACTAAACTACAATTTAAGAGATACAATTTCTCGTAGCACAGTTCAGGTATATCCAAAATCATGGACTGCATTGTACATGCCATTGGACAATGTAGGAATGTGGAATGTGAGATCTGAGAATTGGGCTAGACAGTATTTGGGCCAACAATTTTATCTGAGAGTATATTCAGCTGCAAATTCATGGAGAGATGAGTACCCAATTCCAAGCAATGCACTTCAGTGTGGCAAAGCAGTGGGACACCataattag 1608 0.4036 MGYSKQCLFLVLLVACVSGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLDEPFLISWNGVQQRRNSWQDGVYGTNCPISPGQNFTYILQVKDQIGSYFYFPSTAFHKAAGGYGGFKIASRSVIPVPFDPPSGDFTILAGDWYKRNHTDLRAILDSGSDLPFPDGLIINGHGSNAYTFSVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEVEGTHSLQNTYDSLDIHLGQTYSVLVTADQPPNDYYIVVTTRFTSQVLNASSILHYSNSAGSVSGPFPGGPTIEVDWSVEQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNTAPIINGKQRFAVNSVSFIPADTPLKLADYFKIQGVFSLGSISDNPTGGGGYLQTSVMAADFRGFLEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTISRSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSAANSWRDEYPIPSNALQCGKAVGHHN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01236 535 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Tsu06g01236 535 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Tsu06g01236 535 CDD CuRO_3_AAO_like_1 371 493 IPR034275 GO:0005507
Tsu06g01236 535 CDD CuRO_1_AAO_like_1 25 141 IPR034273 GO:0005507
Tsu06g01236 535 Pfam Multicopper oxidase 374 509 IPR011706 GO:0005507|GO:0016491
Tsu06g01236 535 Gene3D - 23 144 IPR008972 -
Tsu06g01236 535 SUPERFAMILY Cupredoxins 152 330 IPR008972 -
Tsu06g01236 535 Gene3D - 154 329 IPR008972 -
Tsu06g01236 535 Pfam Multicopper oxidase 156 292 IPR001117 -
Tsu06g01236 535 SUPERFAMILY Cupredoxins 340 531 IPR008972 -
Tsu06g01236 535 PANTHER MULTI-COPPER OXIDASE 8 530 IPR045087 -
Tsu06g01236 535 PANTHER L-ASCORBATE OXIDASE HOMOLOG 8 530 - -
Tsu06g01236 535 Gene3D - 339 533 IPR008972 -
Tsu06g01236 535 SUPERFAMILY Cupredoxins 20 170 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01236 Tsu-Chr6 11547062 11551920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01236 - - gmx:100797670 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01236 06 11547062 11551920 Tsu06g01236 06 11547062 11551920 ECH