Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01189 ATGCAGTTATTTCAGAAACACACAAAAGCAcaatttttgattaatttcttaTTAGTAACATCTTCATTTTGTGGCTTTTATGTCATTgcaacaatattaatattaggTACTTCAAATCCAAAGCTATTATTACATTTACATAATTTTTCATCACAAGATGTGTCCATAACTACAAACACAACTCTAGATCATATTGTGTTTGGTATTGCTTCAAGCAAAAGTTCATGGATAAAGAGAAAAGAGTATGTGAAATTATGGTGGAAAACCAACAATGCAATGAAGGGTTGTGTGTTTTTGGATAGTTTACCTCCAAATGAAGATGACCCTTCTTCTTTTCCGCCACTTTGTGTCTCCAAAGATACTTCGCGGTTTAAATACACTTGTAAAGGTGGACTTCGATCAGCTATACGTGTGGCACGTGTTGTTGCGGAGACGGTTGCCTTGAATCATTCGGATGTGAAGTGGTATGTGTTTGGTGATGATGATACAGTTTTCTTTCCGGAGAATTTAGTTAAGACTCTTTCTAAATATGATCATGAGCTTTGGTATTATATTGGTGCACACTCCGAGATTTATGAGCAGAATCGGATTTTTGGTTTCGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATTAGTTCTTCTCTGGCTAAAGTTTTGGCTAAGGTTTTTGATTCTTGTTTGGAAAGATACCCTCATCTCTATGGAAGTGATGGAAGGGTTTATTCTTGCTTATCAGAACTTGGTGTTGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTAACCGGAAACACCTTTGGCCTATTAGCATCACATCCAGTAACACCCTTATTATCTCTCCATCATCCAGATTACACAGAACCAATCTTTCCAAACATGACAACAACAAAAGCCCTACAACATTTATTTCAAGCAGTAAACATTGATTCTCAAAGGATACTACAACAAACAATTTGCTATGACAAATGGTTTTCATGGACAATTTCAGTTTCATGGGGTTATGCTGTTCAAGTATTCCCTAATCATATGTTTTTACCTGATGTTGTTAATGTTCAAGAAACATTCAAGCAATGGAAAAAGGGAAATATGTTAGCAAAAGCATATACTTTTAATACAAAACCACTTCATTCTGATCCTTGTAAAAGATCTActatcttttattttgatagTATTTCTTCTGGTAAAGATGGAATCATAAGTAGCTATTATAAGAGATCTTTTCACAATTGCTCAAAGGATTTGGTGTCTCTAAAGAAAGTTGAAGTCATCAAAGTTGTCACTCATAAGCTAGACCTTGACATCAAGCAGGCTCCAAGAAGGCACTGTTGTGATGTATTGTCTTCTAGTGCTAGTGATCAAATGGAAATTGCTGTTAGAGAATGCAAAGATGAAGAACTGATTTATATGCACTGA 1416 0.3453 MQLFQKHTKAQFLINFLLVTSSFCGFYVIATILILGTSNPKLLLHLHNFSSQDVSITTNTTLDHIVFGIASSKSSWIKRKEYVKLWWKTNNAMKGCVFLDSLPPNEDDPSSFPPLCVSKDTSRFKYTCKGGLRSAIRVARVVAETVALNHSDVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGAHSEIYEQNRIFGFGMAFGGAGFAISSSLAKVLAKVFDSCLERYPHLYGSDGRVYSCLSELGVGLTHEPGFHQVDLTGNTFGLLASHPVTPLLSLHHPDYTEPIFPNMTTTKALQHLFQAVNIDSQRILQQTICYDKWFSWTISVSWGYAVQVFPNHMFLPDVVNVQETFKQWKKGNMLAKAYTFNTKPLHSDPCKRSTIFYFDSISSGKDGIISSYYKRSFHNCSKDLVSLKKVEVIKVVTHKLDLDIKQAPRRHCCDVLSSSASDQMEIAVRECKDEELIYMH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01189 471 Gene3D - 54 307 - -
Tsu06g01189 471 Pfam Protein of unknown function, DUF604 194 444 IPR006740 -
Tsu06g01189 471 PANTHER FRINGE-RELATED 9 469 - -
Tsu06g01189 471 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01189 Tsu-Chr6 10987573 10990173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01189 60 438 Glycosyltransferase AT1G05280 57.364 9.09e-165 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01189 - - gmx:100784602 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01189 06 10987573 10990173 Tsu06g01189 06 10987573 10990173 ECH
Tsu06g01189 06 10987573 10990173 Tsu02g04845 02 57599455 57601625 PCT