Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01171 ATGCCAGAAGCTCCAAAAAAAAACctatccaacaaaaaaaatgttgaaaataatTATGATGGTATTATTAGTAATACTAATAAGAAAGCATTGAAATACATTGAAGATGTTACCATTAACACTGATGAAATTCAAGAAAGAGTACTTGCTGAAATTCTTTCTTGTAGTGCTCTTGTTGAGTATCTTCAACGCCATGGTCTTAATGGGAGGACAGATAGAAAAACTTTCAAAAGGGTTTTGCCTGTGGTGACTTATGAGGATTTGAAAGTGGATATTGATCGTATAGCTAATGGTGATACCTCACAAATTTTGTGCTCTAAACCTATATCTGAGTTCCTTACTAGCTCTGGAACATCAGGAGGGGAGAGAAAATTGATGCCAACAATAGAAGAAGAGTTAGAAAGAAGATCATTACTTTACAGCCTTTTAATGCCAGTGATGGACCAATTTGTTCCCAATTTAGAGAAAGGCAAAGGAATGTACTTTTTGTTCACAAAATCAGAAGCAAAAACACCAGGTGGATTACTTGCACGTCCTGTTTTAACAAGTTACTACAAAAGCACACACTTTAAGAACAAATCACATGAAAATGATCCTTATACAAATTACACTAGTCCAATTCAAACCATTCTTTGCTTAGATTCTTATCAAAGCATGTATTCTCAAATCCTTTGTGGTCTTTATCAAAATGAACAAGTTCTTCGTGTCGGTGCTGTTTTCGCTTCCGGTTTCATTCGCGCAGTTAAATTCCTCGAAAAACATTGGGTCCGTTTGTGTCACGACATACGTAAGGGTACCATAGACGGTGAAATCACCGACCCGAATGTACGAGAGGCAGTTATGAAAATACTTAAACCGAATCCAAAGCTTGCGGCTTTCGTAGAATCCGAATGCAACAAAGAGTCATGGAAAGGGATCATTACTAGGTTATGGCCTAATACAAAATATGTTGATGTTATTGTAACTGGAACAATGTCTCAATATATTCCAATTTTGGATTACTATAGTAATGGTCTTCCTCTTGTGTGCACTATGTATGCTTCTTCTGAGTGTTATTTTGGCCTTAATTTAAATCCTTTGTGTGATCCAAGTGAGGTATCTTATACACTTATTCCAACCATGGCCTACTTTGAGTTCTTGCCTCTTAACAAGATTGATGGAAATGCTGATTCAATTTCTGCCACAGAGCAAGAACATTTAGTTGATCTTGTAGATGTTGAATTAGGTCAAGAATATGAGCTTGTGGTCACCACTTATGCAgGACTTTATAGGTACAGAGTTGGTGACATACTCCGCGTAGCAGGATTCAAGAACAAGGCACCTCAATTTAACTTCATATGCAGAAAGAACGTTGTTCTAAGCATCGATTCAGACAAAACCGATGAAGTTGAGCTGCAAAACGCCGTAAAGAATGGATCAAACCATCTTTCAAACTACAATGCATCACTAATAGATTACACAAGTTCTGCTGACACATCCACAATTCCAGGCCACTACATACTCTACTGGGAAATCACCAAGAACAATCAAAACCCAATTCCTGATTCTGTTTACGAGGAATGTTGTTTTACAGTTGAAGATTCTCTCAACAGCGTGTATCGCCAAGGAAGAATAACAGAATCAATTGGGCCATTGGAAATTAAGGTTGTTGAGAATGGAACATTTGATAAGGTTATGGATTTTGCTCTTAGTCAAGGTGCTTCTATAAATCAATATAAGACACCTCGTTGTGTGAAATATGGTCCTATATTAGAGCTTCTTAACTCTAAGACAGTTTCTAGTTTTTTTAGTCCAAAATGTCCACAATGGGTTCCTGGTCATAAGAAGTGGTGCACCCTTGACTGA 1845 0.368 MPEAPKKNLSNKKNVENNYDGIISNTNKKALKYIEDVTINTDEIQERVLAEILSCSALVEYLQRHGLNGRTDRKTFKRVLPVVTYEDLKVDIDRIANGDTSQILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMDQFVPNLEKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSTHFKNKSHENDPYTNYTSPIQTILCLDSYQSMYSQILCGLYQNEQVLRVGAVFASGFIRAVKFLEKHWVRLCHDIRKGTIDGEITDPNVREAVMKILKPNPKLAAFVESECNKESWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLIPTMAYFEFLPLNKIDGNADSISATEQEHLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNGSNHLSNYNASLIDYTSSADTSTIPGHYILYWEITKNNQNPIPDSVYEECCFTVEDSLNSVYRQGRITESIGPLEIKVVENGTFDKVMDFALSQGASINQYKTPRCVKYGPILELLNSKTVSSFFSPKCPQWVPGHKKWCTLD 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01171 614 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 20 610 - -
Tsu06g01171 614 Pfam GH3 auxin-responsive promoter 34 579 IPR004993 -
Tsu06g01171 614 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 610 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01171 Tsu-Chr6 10766064 10770630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01171 23 597 EF-hand Containing Proteins AT1G23160 50.085 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01171 K14487 - gmx:100783196 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01171 06 10766064 10770630 Tsu06g01171 06 10766064 10770630 ECH