Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01110 ATGTACAGACATAGACCAATGTACACTTCCAACAATGGATTTTCATCTAAAGATAAAAACTTTATCAATGCTGTGGAGCCTTTGTTGTTAGCGAATAAGGTTGACTTGGTCCTTTTTGGCCATGTTCATAATTATGAGAGAACTTGTTCTGTTTATCAGAATAAATGCAAAGCCATGCCTATAAAAGATCAAAACGGAGTAGACATTTATgataacaaaaattatagtGCTCCTGTACATGCTGTCATCGGCATGGCCGGCTTCTCCTTAGACAAAGTCTCAAACAATGCTGATAGCTGGAGTCTTAAAAGGATTTCTGAGTTTGGTTATTTAAGAGCACATGCTACTAGGAACGATTTAAACTTAGAGTTTGTGACATCAGATACAAGAGCAGTTAAGGATAGTTTCCGCATTACAAAGTGA 423 0.3593 MYRHRPMYTSNNGFSSKDKNFINAVEPLLLANKVDLVLFGHVHNYERTCSVYQNKCKAMPIKDQNGVDIYDNKNYSAPVHAVIGMAGFSLDKVSNNADSWSLKRISEFGYLRAHATRNDLNLEFVTSDTRAVKDSFRITK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01110 140 PANTHER PURPLE ACID PHOSPHATASE 2 140 - -
Tsu06g01110 140 PANTHER PURPLE ACID PHOSPHATASE-RELATED 2 140 - -
Tsu06g01110 140 SUPERFAMILY Metallo-dependent phosphatases 4 132 IPR029052 -
Tsu06g01110 140 Pfam Iron/zinc purple acid phosphatase-like protein C 77 135 IPR025733 -
Tsu06g01110 140 Gene3D - 1 140 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01110 Tsu-Chr6 10071416 10072270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01110 4 138 Miscellaneous Gene Families AT1G13900 33.784 2.66e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01110 K22390 - gmx:100802505 236.884