Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01071 ATGGGTTGGGGAAGAGGAATCTTCGAAGCTTCAATAGTGTTAGGATGTCTTTCTTCACTTGGTTGGGCAGGTCTATGGTTTTTGAATCGTCGTCTCTACAAAGAATACGAAGAAAAACGTGTTCTCGTTCAGATCATTTTCAGCATCgtcttttctttctcttgcaATCTTCTTCAACTTGTCCTCTTCGAAATCATTCCCATCCTCTCCAAAGAGGCAAGATTGGTGAACTGGAAGATTGACTTATTCTGTTTGATTCTATTGTTGGTATTTCTTTTACCATATTATCATTGTTACTTGATGCTTAAAAACAGTGGTTTGAGAACTGAAAGGGCTGCACTTGgagcttttttgtttttgattgtttttctttatgGCTTTTGGCGAATGGGCATTCATTTTCCAATGCCGTCGTCTGATAATGGTTTCTTTACTATGCCTCAATTGGTTAGTAGAATTGGTGTCATTGGTGTTACTGTTATGGCTGTTTTATCTGGTTTTGGTGCGGTTAACTTGCCATATAGTTATTTATCACTTTTCATTAGAGAGATTGAGGAAACAGAGATTAAGGCTTTGGAGAGACAACTAATGCAATCAATTGAGACTGCtatattgaagaaaaagaaaattattctCTCTCAAATTGAGATGGAAAATAACCAAGGTTCTCAGGAGAGGTTAACTGCTAGATCTTTTATCAAACGTATTGTTGGTACCGTTGTTCGATCTGTGCAAGAGGACCAAAAGGAGCAAGATATCAAAGGCATGGAAGCAGAGGTAGGTGCTTTAGAAGAGCTTTCAAAGCAGTTGTTCTTGGAAATCTATGAGCTTCGTCAAGCAAAGGAAGCTGCTGCATATTCTCGAACTTGGAGAGGACATATGCAGAATCTACTAGGATATGCTTGTTCCATTTATTGTGTGTATAAGATGATCAAGTCATTGCAAAGTGTTGTTTTCAAACAGGCTGGTTCAGTTGATCCCGTGACAAGGATGATAAGCATATTCCTACAGTTTTTTGATATTGGAATAAATGCAGCCTTATTATCTCAGTATATTTCCTTGCTATTCATCGGATTGTTGGTTGTGATATCAGTGCGTGGATTCTTAACAAATTTAATGAAGTTCTTTTTTGCTGTTTCAAGAGTTGGAAGTGGATCGTCTAGCAatgttgttctgtttttgtccGAGATAATGGGAATGTATTTTTTATCTTCTATTCTTTTGATCAGGAAAAGCTTAGCAACTGAATACAGGATTATTATTACAGAGGTATTGGGTGGCGATATCCAATTTGACTTCTATCACCGGTGGTTTGATGCAATTTTTGTGGCTAGTGCATTCCTTTCACTACTTTTACTATCTGCACATTATACATCTCGCCAAATTGACAAACATCCAATTGATTGA 1407 0.3539 MGWGRGIFEASIVLGCLSSLGWAGLWFLNRRLYKEYEEKRVLVQIIFSIVFSFSCNLLQLVLFEIIPILSKEARLVNWKIDLFCLILLLVFLLPYYHCYLMLKNSGLRTERAALGAFLFLIVFLYGFWRMGIHFPMPSSDNGFFTMPQLVSRIGVIGVTVMAVLSGFGAVNLPYSYLSLFIREIEETEIKALERQLMQSIETAILKKKKIILSQIEMENNQGSQERLTARSFIKRIVGTVVRSVQEDQKEQDIKGMEAEVGALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYACSIYCVYKMIKSLQSVVFKQAGSVDPVTRMISIFLQFFDIGINAALLSQYISLLFIGLLVVISVRGFLTNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLATEYRIIITEVLGGDIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQIDKHPID 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01071 468 Coils Coil 246 266 - -
Tsu06g01071 468 Pfam Abscisic acid G-protein coupled receptor 286 456 IPR025969 -
Tsu06g01071 468 Pfam The Golgi pH Regulator (GPHR) Family N-terminal 143 209 IPR022535 GO:0016020
Tsu06g01071 468 PANTHER G-PROTEIN COUPLED RECEPTOR 89-RELATED 1 468 IPR015672 -
Tsu06g01071 468 Coils Coil 182 202 - -
Tsu06g01071 468 PANTHER GPCR-TYPE G PROTEIN 2 1 468 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01071 - - mtr:MTR_5g005440 793.882