Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01057 ATGGGTTCAGCAGCAGAAGTGTTACCTGAGAGGAGTAGCAATAAACTCCTTGGAATAAGGTTTCTTCAGTATTTAAAAGGAAGTCCTGTTTCCTACAAAACCCACCAAGCAATTGTTCTGATTGTAACATTTTTAGCTTATGCTAGTTATCATGCTACTAGAAAAACCACAAGTATTGTAAAGAGTGTTCTTGATCCACAATCGTCATCGAAAAACAACTTAGGCTTCAGTTTCTCTCCTTTGAAAAGGGTAGTAGTAACAAATCACACTGAGTCAAGGCTTTCTTGGAGCCTTGGTGATGGTTGGGCTCCGTTTAATGGATCGGACGGGACGTCGCTTCTTGGTGAATTGGATGTTGCTTTTCTTGCAATTTATGCTTTTGGGATGTATTTTTCAGGACATTTTGGTGATAGGTGTAATTTGAGGATTTTTTTAACTATTGGGATGGTAGGAACCGGTGTTTTCACTTCGCTCTTTGGATTAGGGTTTTGGGGAAACATTCACAATTTCTATTACTATTTAGTTATTCAAATGATTGCTGGATTGTTTCAATCCACTGGGTGGCCGTCGGTAGTTGCGGTTTTAGGTAACTGGTTTGGAAAGCGAAAGAGAGGGCTTATAATGGGAATTTGGAATGCTCATACTTCTGTTGGGAACATTGCTGGTTCTTTGATTGCATCAGCTATGTTGGGATATGGATGGGGATGGTCTTTTGTTGTGCCGGGATTAATAATGTGTTTCCTCGGTTTGGTGGTTTTCTTAATATTGCCTGTTTCTCCTGAATCAGCTGGAGTTGAGGAAGAGGATGATAGTTGTCTCAAGAAAAGTGGAGATGATGTCACTGAATCTCTCTTAAGGCAAGAGACTCCTGctgaagagaaagaaaaaccaGTTGGATTCATCGAAGCCTGGAAAATTCCAGGGGTTGCTCCTTTTGCTTTTTGTCTGTTCTTTGCCAAATTGGTTGCATATACGTTTCTCTATTGGTTACCATTCTATGTTAGCCATACAGCTATTGATGGAAAATATCTATCTAGTGAGACATCAGGATCACTATCCACTTTATTCGATGTTGGAGGAGTGCTCGGAGGAATTCTAGCCGGACACATTTCTGACCGATTAAATGCTAGAGCCATAACAGCAGCAAGTTTCATGTATTGTGCAATCCCTGCTCTCTTCTTCTATCGAAGTTACGGTCACATTTCGTTGGTTGTAAATGGAGGGTTGATGTTTGTCACTGGTATGTTTGTAAACGGGCCATATGCTCTTATAACAACTGCAGTTTCGGCTGACCTGGGAAcacacaaatccttgaaaggAAATTCACGGGCTCTAGCAACAGTCACGGCTATTATTGACGGAACAGGTTCAATAGGGGCTGCAATTGGACCTTTATTAACAGGGTACATCTCTGCAAAGAGCTGGAGTGCAGTTTTCACAATGTTGATGGGTTCAGCTTTAATTGCAGGGCTGTTTCTCACCAAGCTTGTGGTGTCAGAGGTGGCCACGAAGATTGAAGAATCAAGGTCTAATAGAGCGCCCGAATGTTCACTCGATGTATAA 1563 0.4063 MGSAAEVLPERSSNKLLGIRFLQYLKGSPVSYKTHQAIVLIVTFLAYASYHATRKTTSIVKSVLDPQSSSKNNLGFSFSPLKRVVVTNHTESRLSWSLGDGWAPFNGSDGTSLLGELDVAFLAIYAFGMYFSGHFGDRCNLRIFLTIGMVGTGVFTSLFGLGFWGNIHNFYYYLVIQMIAGLFQSTGWPSVVAVLGNWFGKRKRGLIMGIWNAHTSVGNIAGSLIASAMLGYGWGWSFVVPGLIMCFLGLVVFLILPVSPESAGVEEEDDSCLKKSGDDVTESLLRQETPAEEKEKPVGFIEAWKIPGVAPFAFCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGSLSTLFDVGGVLGGILAGHISDRLNARAITAASFMYCAIPALFFYRSYGHISLVVNGGLMFVTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMGSALIAGLFLTKLVVSEVATKIEESRSNRAPECSLDV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01057 520 Pfam Major Facilitator Superfamily 114 432 IPR011701 GO:0022857|GO:0055085
Tsu06g01057 520 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 513 - -
Tsu06g01057 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 502 IPR020846 GO:0022857
Tsu06g01057 520 CDD MFS_SLC37A1_2 36 500 IPR044740 GO:0061513
Tsu06g01057 520 PIRSF Hexose_phosphate_transp 22 514 IPR000849 GO:0016021|GO:0022857|GO:0055085
Tsu06g01057 520 Gene3D MFS general substrate transporter like domains 304 511 IPR036259 -
Tsu06g01057 520 SUPERFAMILY MFS general substrate transporter 111 497 IPR036259 -
Tsu06g01057 520 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 513 - -
Tsu06g01057 520 Gene3D MFS general substrate transporter like domains 30 270 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01057 Tsu-Chr6 9642340 9645224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01057 1 519 Organic Solute Cotransporters AT3G47420 69.962 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01057 K13783 - gmx:100795072 867.07