Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01056 ATGATGGTGGATTTAGGTCCATTCTCTAACGAGAATTTCGACCCGAAGAAATGGATCAACTCGGCATGTCAGAGTCGTCACCCTCAGGAGTCTTTGGACAAACATCTTGTCGATCTGGAAATGAAACTCCAGATGGTTTCCGAGGAAATCGCCGCTTCTCTTGAGGAACAAAGTGCCGCCGCTCTCCTCCGTGTTCCTCGCGCCACTCGTGACGTCATCCGTCTCCGTGATGATGCTGTTTCTCTCCGTTCTGCTGTCTCCGCCATCCTCCAAAAGCTCAAGAAGGCAGAGGGATCGTCGGCTGAATCTATAGCAGCACTTGCTAAGGTCGATGTAGTCAAGCAGAGGATGGAAGCTGCTTATGAAACGTTGCAGGATGCTGCTGGGTTAACTCAATTAAGTTCGACAGTTGAGGATGTATTCGCCAGCGGTGATCTCCCTCGCGCTGCTGAAACTCTGGCTAATATGAGGCATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAGGATAGGCTAGACACAATGGTGCAGCCTCGTCTCACCGATGCATTATCCAATCGCAAGGTTGATGCTGCTCAAGATTTGCGTGGAATTCTCATTAGAATTGGAAGGTTTAAGTCTCTGGAGTCGCAATATTCAGAGGTACATCTGAAACCAATAAAGCAGCTTTGGGAAGACTTTGAATCAAGAGAACGGGCTAATAAGAATGAAATGGAGAGGACGTCAAGTGGTGGTGATTTTCAGTCAGTTTCACCTACAGTGTCATTCTCCAATTGGTTACCAAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTCCCTGAAGACTATAAAACTCTAGTTCCAAGATTGCTAAGTGAGACTATGATGGCTATAGGTGCCAGTTTCATATCTCATATCAACCTTGCCATTGGGGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTGTCTGATATTTTGTCTGGAGATATGCAAAAGGGTATTAAGCTTCAGACTAAGCACCTCGAGTCCTTGATTGAATTACACAATATCACGGGGACCTTTGCAAGGAATATCCATCACTTGTTTTCGGGTTCTGATGTACGAGTTTTAATGGATGTGCTGAAAGCTGTGTACTTGCCATATGAATCGTTTAAACAgagGTATGGACAAATGGAGCGTGCCATCCTTTCCTCTGAGATTGCAGGAATAGATTTAAGAGGAGCTGTAATTCGAGGGGTGGGAGCCCAAGGAGTTGAACTCAGTGAAACTGTTCGTAGGATGGAGGAGTCTATTCCTCAAGTTATTATACTCCTTGAAGCAGCTGCCGAGAGATGCATCAGCTTCACTGGAGGTTCTGAGGCAGATGAGCTGATTCTTGCCCTTGATGACATAATGTTACAATACATTTCCACTCTGCAAGAAACTCTCAAGTCACTAAGAACTGTCTGTGGTGTGGATTATGGTGGGGATGGTTCTGGAAAGAAAGAGATGGAGAAGAAAGATGGAAACCAAAATGCTCGGAGAGTTGATTCGATCTCAAATGAAGAGGAATGGTCCATGGTCCAAGGGGCACTGCAGATCCTTACAGTTGCAGATAGTTTGACAAGCAGATCTTCTGTCTTTGAAGCATCTTTAAGAGCTACTCTTGCTAGATTAAGCACAACTTTATCTTTTTCAGCATTTGGTTCAAGTCTAGATAAAAACCAGACTATAAATAATGATGAAGATGTGGAGCCATCTTTTGGTGGAAGGGCTGCCTTGGACATGGCAACACTGCGGCTGGTTGATGTGCCCGAGAAAGCCAGAAAACTCGTCAGCCTTTTGAATCAGTCTAAAGATCCCCGTTTCCATGCTCTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGAAGACACAGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTTCGGCAACGCCTGAGTGATGTGTCCCGCTTGCCAATATGGTCGTCAGTTGAGGAACAAAGTGCTTTCCATCTCCCTACGTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGTGAGTATCTTCTTACTTTACCCCAACAATTGGAGCCCCTTGCTGAGGGAATATCTAGCAGCGAAGCAAATGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTTTACATAGAACAATTGCGTGGGATTCAGTACATTACAGATCGTGGTGCGCAGCAGCTATCAGTTGATATTGATTATCTTAGTAATGTGCTTTCCGCTCTGTCAATGCCCATCCCTGCAGTTCTGGCTACATTTCACAGTTGTCTGTCTACCCCAAGAGACCAACTAAAAGATTTTCTGAAGACAGATTCATCAAACCATCTTGATCTTCCAACAGCAAACCTTGTGTGTAAGATGCGGCGTGTGAATTTAGATTCATGA 2490 0.4446 MMVDLGPFSNENFDPKKWINSACQSRHPQESLDKHLVDLEMKLQMVSEEIAASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSEVHLKPIKQLWEDFESRERANKNEMERTSSGGDFQSVSPTVSFSNWLPSFYDELLLYLEQEWKWCMIAFPEDYKTLVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTKHLESLIELHNITGTFARNIHHLFSGSDVRVLMDVLKAVYLPYESFKQRYGQMERAILSSEIAGIDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAAERCISFTGGSEADELILALDDIMLQYISTLQETLKSLRTVCGVDYGGDGSGKKEMEKKDGNQNARRVDSISNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSSLDKNQTINNDEDVEPSFGGRAALDMATLRLVDVPEKARKLVSLLNQSKDPRFHALPLASQRVAAFEDTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQSAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSEANDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSALSMPIPAVLATFHSCLSTPRDQLKDFLKTDSSNHLDLPTANLVCKMRRVNLDS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01056 829 Pfam Golgi complex component 7 (COG7) 4 824 IPR019335 GO:0006886|GO:0017119
Tsu06g01056 829 Coils Coil 36 56 - -
Tsu06g01056 829 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 823 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01056 K20294 - gmx:100794449 1450.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01056 06 9626753 9633039 Tsu06g01056 06 9626753 9633039 ECH