Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01055 ATGGCTTCCTCTCTGGCAGTCAAGCGCTTTCTCTCTTCCTCCAACCTCCTCTCAAAGTCTCTCCGTCCCGCCGCCTCCACCGCTTCCCGCTCTTTCAACACCAACGCCATGCGCCAGTACGATGAACATTCCGATGATCGCAATGTCGACGTCGATCGTCGCTCTGATCGTTCTTTCCCTCGCAATAACCTCTTCTCAGATGTTTTCGATCCGTTTTCTCCAACTCGAAGTTTAAGCCAAATCTTAAACACGGTGGATCAACTAATGGACAATCCATTCATCACTGCTTCCCGTGGAATTGGAGCCGGTGCAGTTCGACGTGGCTGGAATGCGAAAGAAACAGAGGATGCTCTGCATCTCCGTGTTGATATGCCTGGACTTGGTAAAGAAGATGTGAAGATCGCTGTTGAACAGAACACGCTTACAATCAAAGGTGAAGGTGCTAAAGAAAGTGAGGAAGAAGAGGAAAGTGTTCGTCGATTCACTAGCAGACTTGATTTACCTGAGAAGCTTTATAAGCTTGATCAGATTAAAGCTGAGATGAAAAATGGTGTTCTTAAGGTTATTGTACCTAagatgaaggaagaagaaagaaacgATGTTATTAATGTTAAGGTTGAGTAG 624 0.4423 MASSLAVKRFLSSSNLLSKSLRPAASTASRSFNTNAMRQYDEHSDDRNVDVDRRSDRSFPRNNLFSDVFDPFSPTRSLSQILNTVDQLMDNPFITASRGIGAGAVRRGWNAKETEDALHLRVDMPGLGKEDVKIAVEQNTLTIKGEGAKESEEEEESVRRFTSRLDLPEKLYKLDQIKAEMKNGVLKVIVPKMKEEERNDVINVKVE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01055 207 CDD ACD_sHsps-like 112 192 - -
Tsu06g01055 207 MobiDBLite consensus disorder prediction 27 56 - -
Tsu06g01055 207 Gene3D - 63 206 IPR008978 -
Tsu06g01055 207 Pfam Hsp20/alpha crystallin family 111 206 IPR002068 -
Tsu06g01055 207 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 100 207 IPR002068 -
Tsu06g01055 207 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 206 IPR044656 -
Tsu06g01055 207 SUPERFAMILY HSP20-like chaperones 92 198 IPR008978 -
Tsu06g01055 207 MobiDBLite consensus disorder prediction 39 56 - -
Tsu06g01055 207 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01055 Tsu-Chr6 9621870 9622816 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01055 K13993 - gmx:547852 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01055 06 9621870 9622816 Tsu06g01055 06 9621870 9622816 ECH