Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01049 ATGACTTACATAATGAGGAACTTTGTTAGTACTTATATGGTTtttcatataataattttaaccTTAGTTTGTGAAGCTAGGTTAATACGTGTTACACCAAGCTTTGTTGAAAGAAAAGGCACAGAATTTATGTTGAATGGTTCTCCTTTTTTGTTCAATGGTTTTAATTCTTATTGGATGATGAATGTAGCTTCTAATCCAAATGAAAGGTATAAAGTTTCTAATGTATTTAGAGAAGCTTCAGCTGCAGGTCTCACTATATGTCGTACATGGGCATTTAGTGATGGTGGTAATCAATCTTTACAAATATCCCCTGGCATATACAATGAGAATGTATTTCagCAGGCATTAGATTTTGTGATAGGTGAAGCAAAAAAGAATGGTGTGcgtttgattttgagtttggTGAACAATTACAAGGATTTTGGAGGAAGGCCTCAATATGTGGAGTGGGCTAATAGTAGTGGGGTTCAAGTCAATAATGATGATGACTTTTACACAAATCCTGTTATTAAGGGTTACTACAAAAACCATGTCAAAAGTGTGTTGACCAGGATCAACACAATCACTAAAATCGCTTATAAAGATGAACCAACCATCATGGCTTGGGAACTAATCAATGAACCACGTTGCCAAGTTGATTATTCTGGCAAGACCATTAACGCATGGGTTGAGGAGATGGCTCCATATGTGAAATCTATTGACAAAAAACATTTATTGGAGGTTGGATTGGAAGGATTCTATGGAGATTCTATCCCAGATAGGAAACAATACAATCCTGGTTTTCAAGTTGGCTCTGATTTTATTTCCAATAATCTCGTTAACGAAATTGATTtcgcaacaatccatgcatatCCTGATAATTGGTTAACCGGACAAAATGATACCGTGCAAATGGCATTCATGCAAAGATGGATGACGAGTCATTTGGAAGATTCACGAACAATTTTGAAGAAGCCATTGGTGTTTACAGAATTTGGGAAGTCGAAAAATGATCCGGGGTATGATATAAGTTCAAGAGATTCATTCATGAATTCAGTTTATTCAAGCATCTATGGTTTGGCACAAAATGGAGGAACATTTGCTGGGGGATTAGTTTGGCAACTTTTGGATGAAGGAATGGATTCATATAATGATGGATATGAAATTGTTTTGACTCAAAGCTCTTCTACAAGTAATGTTATTAGTCAACAATCTTCTAAAATGATTGCACTTGAGCATAATTTGGGCATTAAGCACTGA 1242 0.3406 MTYIMRNFVSTYMVFHIIILTLVCEARLIRVTPSFVERKGTEFMLNGSPFLFNGFNSYWMMNVASNPNERYKVSNVFREASAAGLTICRTWAFSDGGNQSLQISPGIYNENVFQQALDFVIGEAKKNGVRLILSLVNNYKDFGGRPQYVEWANSSGVQVNNDDDFYTNPVIKGYYKNHVKSVLTRINTITKIAYKDEPTIMAWELINEPRCQVDYSGKTINAWVEEMAPYVKSIDKKHLLEVGLEGFYGDSIPDRKQYNPGFQVGSDFISNNLVNEIDFATIHAYPDNWLTGQNDTVQMAFMQRWMTSHLEDSRTILKKPLVFTEFGKSKNDPGYDISSRDSFMNSVYSSIYGLAQNGGTFAGGLVWQLLDEGMDSYNDGYEIVLTQSSSTSNVISQQSSKMIALEHNLGIKH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01049 413 Gene3D Glycosidases 32 406 - -
Tsu06g01049 413 Pfam Cellulase (glycosyl hydrolase family 5) 46 333 IPR001547 GO:0004553|GO:0071704
Tsu06g01049 413 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 6 411 - -
Tsu06g01049 413 PANTHER - 6 411 IPR045053 GO:0004553
Tsu06g01049 413 SUPERFAMILY (Trans)glycosidases 35 394 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01049 Tsu-Chr6 9583406 9586358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01049 15 406 Glycoside Hydrolase AT5G66460 54.061 4.98e-159 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01049 K19355 - gmx:100778515 701.049