Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01048 ATGGCGCTTAAAACCCTATCCACTTTCATAACACCACTTTCTCTCCCAAACCACAAATTTCCACAAATTCACACCAAACCATGCCTCATTCTCTGCGAATTATCACGTCCGTCCAAATCGCGTCTATCTTCCGCCCTACCAGAAGGCACCGGCGCAGCTGCTCCGTCACCGGGAGAGAAGTTCCTCGAACGCCAGCAATCAATTGAAGCAACTAAACGCATCCtcaaagaaaacaacaaaatcaacaacagtagaaagaaagagaagaagccTCTCAAAGCTTCCACTTCGGTCGCTTCTTGTTATGGCTGTGGTGCTCCTTTACAAACTTCCGAAAATGATGCTCCTGGTTTTGTCGATCCCGAAACCTATGAATTGAAGAAGACACATCATCAGCTGAGAACCATTCTCTGCGGGCGGTGCCGGCTTTTATCTCATGGTAAAATGATAACTGCTGTTGGAGGTCATGGAGGATACTCTGGTGGAAAACAGTTTGTTACGGCTGAAGACCTTCGAGAAAAATTGTCTCATTTGCGTGATGCCAAAGCTCTAATTGTTAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGGCACGAGTGCGAGATCTTGTTGGTGCTAATCCAATAATAATGGTGGTGACTAAGATTGATCTCCTTCCAAGAGATACTGATCTTAATTGTATTGGGGATTGGGTTGTAGAGGCTACCACAAAAAAGAAGCTGAATGTTCTAGGTGTCCATCTCACGAGTTCAAAATCATTGGTAGGAATAACTGGGGTAATATCAGAAATCCAGAAAGAGAGAAAGGGAAGAGATGTTTACATTCTGGGTTCGGCTAATGTTGGAAAATCTGCTTTCATCAATGCCTTATTAAAGACAATGGCTTTTAACGATCCAGTGGCAGCAGCTGCACAAAGATACAAACCAGTACAGTCTGCTGTTCCTGGAACTACATTAGGGCCAATTCCAATTAATGCTTTCCTTGGAGGAGGGAAACTGTATGACACTCCAGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTATCCTCCCTTGCTCCTAAAAGCCGACTGAGGGGCCTATCTTTCCCAAGTTCTCAAGTAATTTCGAACAATACAGAGGAAGGTGCttcaacagtaaatggcttgaaTGGATTTTCAATATTTTGGGGAGGCCTTGTTAGAATTGATGTCTTGAAggttttgattatattttttcatttttag 1248 0.4038 MALKTLSTFITPLSLPNHKFPQIHTKPCLILCELSRPSKSRLSSALPEGTGAAAPSPGEKFLERQQSIEATKRILKENNKINNSRKKEKKPLKASTSVASCYGCGAPLQTSENDAPGFVDPETYELKKTHHQLRTILCGRCRLLSHGKMITAVGGHGGYSGGKQFVTAEDLREKLSHLRDAKALIVKLVDIVDFNGSFLARVRDLVGANPIIMVVTKIDLLPRDTDLNCIGDWVVEATTKKKLNVLGVHLTSSKSLVGITGVISEIQKERKGRDVYILGSANVGKSAFINALLKTMAFNDPVAAAAQRYKPVQSAVPGTTLGPIPINAFLGGGKLYDTPGVHLHHRQTAVVHSEDLSSLAPKSRLRGLSFPSSQVISNNTEEGASTVNGLNGFSIFWGGLVRIDVLKVLIIFFHF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01048 415 Pfam 50S ribosome-binding GTPase 275 345 IPR006073 GO:0005525
Tsu06g01048 415 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 172 344 IPR030378 GO:0005525
Tsu06g01048 415 CDD YqeH 138 341 - -
Tsu06g01048 415 Gene3D - 169 345 IPR027417 -
Tsu06g01048 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 345 IPR027417 -
Tsu06g01048 415 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 39 409 IPR044229 GO:0003924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01048 K13427 - gmx:100798614 659.833