Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01035 ATGACGATGATGAGCAACATGAATGAATCAGAATCGAAGCTAGACATGAGAAGAACTGCAAATTATAAACCCAACATTTGGAAACACGATTTTCTTCAGTCTCTTCCCAGCAAATATGATAAAGAAGAATATGCTATGCAGTTAAACAAGTTGGTGGTTGAAGTAAAATGCCTTTTGGTTCAAGAATTGGACGTTTTGCAAAAATTAGAGTTGGTTGATTGGATTCATAAACTAGGCCTTGCCAATCACTTTGAGAAGGAAATAGATGAATTTCTTCAAACTATATTTGTCTCTGCCcaaaattttaacaaatttaatgTGCAAGATAATATGCACATGTCTACTCTATGCTTCAAGCTTTTAAGGCTGCATGGTTACCATGTTTTTCCAGCAGATATACTAAGCAGCTTCTTAGATGTGAGGGACAGCTCATTTGCTAGTAATCTTGAAAATATCATAGAGCTTCTTGAGGCCTCACATTTGGGTTTAGAAAGTGAACAAATCTTGGAAGAGGCCAAAGAATTTGCAATAAATTGGCTCAAAGATGCTCTCACGTCTACTTCAAGTTCTATCAAGATAGAACTATGTGATAATATGGTTGTTCAAAGAGTGGTCCATGCCTTGGAACTTCCTTCTCATTGGAGAGTATCATGGTTTGATGTGAAATGGCACATGAAGCAATACCAAACTATAGAACACATGGACCCCGTTTTACTTGAGCTCACTAAATTAAACTTCAACATTATACAATCTAAACTTCAAAAGGAGGTCAAGGAATTATCCAGGTGGTGGGAGAAACTTGGCGTAAAAGAAGACTTGTGTTTTGCAAGAAATAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAGGCCAAGTATAAATCCTTGAGGAAATGGCTTactaaaatgattatttttgtattaGTGATTGATGATATTTATGATATCCACGCCACATTTGAAGAATTGAAGCCGTTTACAACGGCATTTCAtagATGGGATGCCAAGGAAATTGAAGAACTTCCAGAGTACATGAAGATTTGCTTCAATGCACTTCAAGATATCACAAATGAAATTGCTTATGATATTGGAGGAGAAAAGAATTTCGATATGGTGTTACATTGCCTAAAGAAAAcgTGGATTGAGTTTTGCAAGGCGTTATATGTGGAAGCAAAGTGGTACAAAATGGGATATATTCCATCGTTGCAAGAATATCTAAACAATGCATGGATTACATCTTCAGGGCCATTAATTTTACTGCATTCATATTTTGCCACAATGTTTGAATATACAGATGAGATAGATGATTTTCCACACATGTATGAAGATTTGGTCTACAATGTATCTCTCATCATTCGGTTGTGCAATGATCTTGGGACCGCAGTGGCTGAAAGGGAAAGAGGTGATGCTGCTTCGTCAATTGTATGCTACATGAATGAAATGAATGTTTCAGAGGAAGAAGCAAGAAAACATATACAAGACATTATAAACAGTGCATGGAAAAAGATTAATGGACACTGTTCAACTCCAATTGCTTGGTTGGAACCATTTTTTAATCAAGCCAAAAATGCAGCACGTGTGGCCCATACTCTTTATCTAAATGGAGATGGGTTTGGTATACAAGATCGAGAtatcaaaaaacacattttatcaCTTGTTGTTGAACCTTTCTAG 1683 0.3565 MTMMSNMNESESKLDMRRTANYKPNIWKHDFLQSLPSKYDKEEYAMQLNKLVVEVKCLLVQELDVLQKLELVDWIHKLGLANHFEKEIDEFLQTIFVSAQNFNKFNVQDNMHMSTLCFKLLRLHGYHVFPADILSSFLDVRDSSFASNLENIIELLEASHLGLESEQILEEAKEFAINWLKDALTSTSSSIKIELCDNMVVQRVVHALELPSHWRVSWFDVKWHMKQYQTIEHMDPVLLELTKLNFNIIQSKLQKEVKELSRWWEKLGVKEDLCFARNRLVESFMCAAGVAFEAKYKSLRKWLTKMIIFVLVIDDIYDIHATFEELKPFTTAFHRWDAKEIEELPEYMKICFNALQDITNEIAYDIGGEKNFDMVLHCLKKTWIEFCKALYVEAKWYKMGYIPSLQEYLNNAWITSSGPLILLHSYFATMFEYTDEIDDFPHMYEDLVYNVSLIIRLCNDLGTAVAERERGDAASSIVCYMNEMNVSEEEARKHIQDIINSAWKKINGHCSTPIAWLEPFFNQAKNAARVAHTLYLNGDGFGIQDRDIKKHILSLVVEPF 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01035 560 Pfam Terpene synthase family, metal binding domain 239 505 IPR005630 GO:0000287|GO:0010333|GO:0016829
Tsu06g01035 560 PANTHER OS04G0344100 PROTEIN-RELATED 16 560 - -
Tsu06g01035 560 Coils Coil 146 166 - -
Tsu06g01035 560 SFLD Isoprenoid Synthase Type I 235 559 - -
Tsu06g01035 560 PANTHER ALPHA-FARNESENE SYNTHASE 16 560 - -
Tsu06g01035 560 CDD Terpene_cyclase_plant_C1 17 559 IPR044814 GO:0010333|GO:0016102
Tsu06g01035 560 SUPERFAMILY Terpenoid synthases 234 560 IPR008949 -
Tsu06g01035 560 Gene3D - 63 234 IPR036965 GO:0010333|GO:0016829
Tsu06g01035 560 Gene3D Farnesyl Diphosphate Synthase 24 550 IPR008949 -
Tsu06g01035 560 SFLD Terpene Cyclase Like 1 C Terminal Domain 235 559 IPR034741 -
Tsu06g01035 560 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 23 231 IPR008930 -
Tsu06g01035 560 Pfam Terpene synthase, N-terminal domain 26 207 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01035 Tsu-Chr6 9428309 9435730 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01035 K14173 - gmx:100812119 780.785