Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00993 ATGGCTAATGTTTTGAAGAGTAGCACTGTTGTTATgctctcttttctctcttcagGTACCACTACACTTTCACGAACAACAACAACGACCCATTGTTCATTTCTTCCAAAGTTCCCTTTTTTCTcactctcatcttcttctcgTTCAAAAACCCCATCTGGGTTCTCTTCATTTTGCACTCTTTCATCTGAGCCAGTCACAGAACCCATAGCTGTTGAAAACAATGCTGAAAATGACAACAAGAGTACTATTAAGGATGCTGCTGGGTTGCTTGATATAAGGGTTGGTCAGATTGTAAAGGCATGGAAACATGATGAAGCCGAATCACTTTATGTTGAAGAAGTTGATATTGGTGAGTCTGAACCTAGAATCATATGCAGTGGTCTTGTCAATTATATCCCTCTTGAAAATCTTCAGGGGAAAAAAGTTATTGTTCTTTCCAATCTGAAGCCAAGAAATATGCGTGGTGTCAAGTCTAGTGGAATGTTGATGGCTGCTTCTGATTCAAAGCATGAGAATGTTGAACTTCTGTTCCCTCCCGAGGAAGCAACTCCTGGAGAAAGAATATGGTTTGGATCTGAAGATGAAAAGGATAATCAACCTGATGCTGCCACTCCGAATCAGatacaaaagaaaaagatatggGAATCGGTGCAGCCTCATCTTAAAACAGATGTTTCTTGTACTGCAATGCTAGGTGAGCATGTCATGCGTACATCTGCAGGTTCGGTGACAAGCCAGTCTTTGCAGAATGCCAATATCTCCTGA 768 0.3802 MANVLKSSTVVMLSFLSSGTTTLSRTTTTTHCSFLPKFPFFSLSSSSRSKTPSGFSSFCTLSSEPVTEPIAVENNAENDNKSTIKDAAGLLDIRVGQIVKAWKHDEAESLYVEEVDIGESEPRIICSGLVNYIPLENLQGKKVIVLSNLKPRNMRGVKSSGMLMAASDSKHENVELLFPPEEATPGERIWFGSEDEKDNQPDAATPNQIQKKKIWESVQPHLKTDVSCTAMLGEHVMRTSAGSVTSQSLQNANIS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00993 255 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 74 255 - -
Tsu06g00993 255 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 74 255 - -
Tsu06g00993 255 CDD tRNA_bind_EMAP-II_like 90 190 - -
Tsu06g00993 255 Gene3D - 87 255 IPR012340 -
Tsu06g00993 255 SUPERFAMILY Nucleic acid-binding proteins 87 254 IPR012340 -
Tsu06g00993 255 Pfam Putative tRNA binding domain 93 188 IPR002547 GO:0000049
Tsu06g00993 255 ProSiteProfiles tRNA-binding domain profile. 87 190 IPR002547 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00993 Tsu-Chr6 9033593 9037855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00993 - - gmx:100499829 334.724