Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00960 ATGGATACGAGAGTCATAGTTTATTGGGCCTGGACATCTAAATCCAAGGAAAGACTCATTAGGGGTGTAACACGCGCGTTATACTCATCTTTTTCTTCACCTTCACCTCTCTCACTAATAAAAcgcatatttttattttgcacTGAACCTTCTTCATCTTCGTTTCGGCTACACCCTTCTTTCTCGTTCACAACGCAATCTTTCTCCAACCCTTGGATCTCATCTTTCTGGTTCGGTTGGGGTTTTTCGTTTTCGAGTTCAATCCGTAGCTTTTGGTTATCGaatctttcacaaatttttctaGgtttatgcatgattggAGCTTTACAGTCACAATGTACTCATTTGTATTGTAAACCGTGTTTGACGTATGTCGTGAGTACTACGAGAGCTTGTCCTTATGATGGTTATTTGGTCACTGAGGCTGATTCCAAGCCTTTGATAGAGTCAAATAAGACATTGGCTGAAACTATTGGAAAAATAGCAGTTCATTGTTTGTACCATAGGAGTGGATGCTCATGGCAAGGAACTTTGTCTGAGTGTACAACTCATTGTTCTGGATGTACTTTTGGCAATTCTCCTGTTGTTTGCAATAGGTGTGGGATTCAAATAGTGCATCGTCAAGTGGAAGAACATGCACAAACTTGTTCTGGTCAGGTGCAGCAAGGGGCCGTTATCCAGGATCCTTCAGCTACCAGTGCTACTGCTGTAGCATCTACTGATCAGAACCAGGTTGCTGCTTCAGCTGCAGCAACAGCTTCACAACCAGTGACTTCTCAAACAGTTGTTGCACCTACTGCAGCTGGGCAAGTTCCAAATCAGCTACCCAACCCAACATCTCAAACCCAATCTTTAGGTCAAACTGTTGTTCAGCCAACGGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATACTACCAGCAATACCCCGGACAAGATCCATACCAACAGCAGTATCAACAGTATTACCCCTATCAACAGTCTGCAGTTCCACAATACCAGCAGGCCTATGTCCAGCCTCAACCTCAGCCACAGGGACAGCCCCAGTCACAGCCTCAAGCTCAAGCTCAAGCACAACCGCAGGCTCAAGGACTCTCACAACCGGTTTCACATGTGCAGACTCCTGTGGTCCCGCAATCTCAAAATCAGATGCAAGTTCACCAACAACCACAACAACTTCAACCTGCTGTACAGCCACATGGTCAGATGAGTCACCCACCTGGCCATGGTCAAGCCTTCCCTCAGCCTCAGTCTTATCCTTACCCCCAAGTTCAGCCTCATTCTGGGCAACCTCAACCCCATATGCAAATCCCTCCTTATCAGCAACCTCATCCTCAAATGCTGCATTCACAACCTCAAAATCAGCAACCAGTTCAGAAGTATCCAGTTCCTCAACCCCAAGTTCATCCACAAATGCAACCTAATGCTCCAGTTCAACATCCTTCTCAGCCTCATATGCAATCCCACCAGCCTGTGAATCCTAATGTACAACCTCAAGCGCAAAATGCAATGCCACATGCTGTGACAGGTCATCACTCTTATCCCCAACCTCTGCCTCATCAGAATATGCAAGTGGGAGCCCCTCAATCTAATAATATGCACTTGAATCCTCAAAACGGCCCTCAACACCAGGGCCAGCATTCTGTCCAGGTGCAGAATCAGTTTCCTCAGCAAACTCCAATGCGCCCAAATCAGTCACATGCTATGTATCCTAACCAGGCTTTGTTACCTTCATCTGTTCAAGGTCAAAACACCTTTCCTCTGCAACAGCAGCCAGGATATAATCCTAATCAACAAACTGGACAAACCAATCAACGTCCTATTTCGCAACCGGTTCAACAAATATTACCTCAGCAACCATATGCGCAACCCATGCCATCTCATCTACGACCCCAAGGTCCAGCAAATTCATTTCCCAAGCAGGCTTATCCACAGCCCAAGGGTAATACTGCACCATCTCAAACTCCTGTTGGAAGGCCTTCAATTTCCAATCATGCAGGACATGGACAGCCTTTTGCACAATCTGCCAATACAATTCCTGTTAGACCCGGGAATCAGAATTTGTTGGCTGGGGCCAATAATCAAGTGCAGTCAAGGGCACCGGAACCAATTGATAAACAAGGTGTCACTGAGCAACAAACTGACTCTGCCTCTGGGAAACTCGGAAAAAATGAGTTGAAATCTGAAAAGGAAACAAATTTGAAATCAACTGAGGTTGGGAGTAAGCAAAATAGTGAAGATCCACACTCTGTGAAGACTTCAGGTCCAAATGCTAATGCATTAGAAAATGGTGATacattgaataaaaatattggAAAGGGAGATGCTTCTGGAAACACTGGGGTTCAacataatagtaataatgaGCATGCTGTTGTCCAAGGCAACGGGGTTCAAGATGGACCTCCACTGAAGACAGAGGCTAAATTATCTGAATCAGAAACTGATAAACTCCATAATGACGATACATCTGCTCCAAGACCTCCTTCTGGTGCTGACAATTCTGCACCGGTTGTCTCTCAGACCAATGGTGGTCATGGACCTGGGGGTTTAGCTCAGCCATCTCATCCAGTTTCTTTTCAGACATCACAATTGCCAAATCCAACAGGTCCAAATCAGCATCTCTCTGCAACAAACGCTTCAACTCTTCTCAGGAATCATGGAACTGCACCTGCTCCTCATTCTGGACAGCACTTAAACTCGATGGATAATTTTCAGCCAACCATGTTCAACCAACCACATGGTTCTGATGTCCAGTTTAATATTCCAGGGCGCAACTTTCAACACCAGCCTCATGGAGCCCCAGCAGGACCATATAACCAAGGTCATGAACCACCTTTCCATACTGGAGCTTCGAATTTGTCTCGAGGGCCACCGTTCGGTGCACCCCCACATGGAGATATGCATGGTGGAATGGCAGCCAACTTTCCACCACACACTCCTGAAGGTTTTGGTGTGCAAGATGAAAGGTTCAAATCTTTTCAGATTCAAAGTCAACAAAATATTGATCGGAGAGAGTTTGAAGAAGATCTCAAAAAATTCCCTAGACATCCTTTGGATGCTGAGCCTGGTTCTAAATTTGGAAATCATTCATTTGGTCCACATGATGCTGGAAAGAGACCAGTTGGTTTTCATGATGAGGCCATCAAGAAAGCAGGTTCAAATCGTCATCCTGGTCATCTTGGACCAGGTCCTGGATATGGGGTACATCACATGGATGGTATGGCTCCAAGAAGTCCTGGCAGTGAATACATTGATATGCCTTCCCGGAGATTGGGGCCCCTCTCTGGTGGTCTTATTAGTAAGTCAGGTATAGATGATTTTGAAGGCAGAACTGCAAGTCGATTTGGTGATTCAGGTGGCATTGCATTCCGTGATGGTCGATTTCCTCATCCCCCTAGCCATATGCCTAGAGACGAATTTGATAGTTTTGGTAATTTTCGAATGGGTGAACATCCAAGGAGGGGCAATTTCATTGGTCAAGACGAATATTCTGGTCATTTCCAAAGGGGTGAACATTTGGGTGCACATGATTTTCCTAGACATTTGCATCTTGGGGAGCGTATCGGTTTTGGGGATCATCCTGGTCATATGCGAGCCTTTGAACTCAGTGGTTCTCGGAGTTTTGAATCTTTTACCAAAGGCAATCGGCCAGGTCATCCACAGCTCGGTGAACCTGGGTTTAGGAGCAGCTTTTCCCTTGCAGGGTTTAATAATGATGCTGGATTTTTAACAGGAGATACCAGGTCGTTTGATAATTTGAGGAGAAGAAAGGCTGCCAGTATGGGATGGTGCCGAATATGTAAAGTTGACTGTGAAACTGTCGAAGGCTTGGAATTGCATTCTCAAACAAGGGAGCATCAGAAGATGTCCATGGATATAgttaaaacaatcaaacaaaatgCGAAGAAACAGAAACTaaTACCCAGTGAACAATCCTCAGTTGAAGATGGAAATAAGACACGGACTACTGGTTATGAGGGTCATGGAAATAAGCATTGA 4005 0.4427 MDTRVIVYWAWTSKSKERLIRGVTRALYSSFSSPSPLSLIKRIFLFCTEPSSSSFRLHPSFSFTTQSFSNPWISSFWFGWGFSFSSSIRSFWLSNLSQIFLGLCMIGALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLIESNKTLAETIGKIAVHCLYHRSGCSWQGTLSECTTHCSGCTFGNSPVVCNRCGIQIVHRQVEEHAQTCSGQVQQGAVIQDPSATSATAVASTDQNQVAASAAATASQPVTSQTVVAPTAAGQVPNQLPNPTSQTQSLGQTVVQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQQYYPYQQSAVPQYQQAYVQPQPQPQGQPQSQPQAQAQAQPQAQGLSQPVSHVQTPVVPQSQNQMQVHQQPQQLQPAVQPHGQMSHPPGHGQAFPQPQSYPYPQVQPHSGQPQPHMQIPPYQQPHPQMLHSQPQNQQPVQKYPVPQPQVHPQMQPNAPVQHPSQPHMQSHQPVNPNVQPQAQNAMPHAVTGHHSYPQPLPHQNMQVGAPQSNNMHLNPQNGPQHQGQHSVQVQNQFPQQTPMRPNQSHAMYPNQALLPSSVQGQNTFPLQQQPGYNPNQQTGQTNQRPISQPVQQILPQQPYAQPMPSHLRPQGPANSFPKQAYPQPKGNTAPSQTPVGRPSISNHAGHGQPFAQSANTIPVRPGNQNLLAGANNQVQSRAPEPIDKQGVTEQQTDSASGKLGKNELKSEKETNLKSTEVGSKQNSEDPHSVKTSGPNANALENGDTLNKNIGKGDASGNTGVQHNSNNEHAVVQGNGVQDGPPLKTEAKLSESETDKLHNDDTSAPRPPSGADNSAPVVSQTNGGHGPGGLAQPSHPVSFQTSQLPNPTGPNQHLSATNASTLLRNHGTAPAPHSGQHLNSMDNFQPTMFNQPHGSDVQFNIPGRNFQHQPHGAPAGPYNQGHEPPFHTGASNLSRGPPFGAPPHGDMHGGMAANFPPHTPEGFGVQDERFKSFQIQSQQNIDRREFEEDLKKFPRHPLDAEPGSKFGNHSFGPHDAGKRPVGFHDEAIKKAGSNRHPGHLGPGPGYGVHHMDGMAPRSPGSEYIDMPSRRLGPLSGGLISKSGIDDFEGRTASRFGDSGGIAFRDGRFPHPPSHMPRDEFDSFGNFRMGEHPRRGNFIGQDEYSGHFQRGEHLGAHDFPRHLHLGERIGFGDHPGHMRAFELSGSRSFESFTKGNRPGHPQLGEPGFRSSFSLAGFNNDAGFLTGDTRSFDNLRRRKAASMGWCRICKVDCETVEGLELHSQTREHQKMSMDIVKTIKQNAKKQKLIPSEQSSVEDGNKTRTTGYEGHGNKH 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 808 824 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 622 987 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 584 608 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 828 849 - -
Tsu06g00960 1334 SUPERFAMILY TRAF domain-like 160 217 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 339 400 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 1040 1055 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 856 927 - -
Tsu06g00960 1334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 194 IPR013083 -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 738 795 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 1304 1322 - -
Tsu06g00960 1334 ProSitePatterns Zinc finger RING-type signature. 113 122 IPR017907 -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 339 569 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 1016 1084 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 516 569 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 473 507 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 1301 1334 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 639 722 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 417 432 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 723 737 - -
Tsu06g00960 1334 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 108 1333 - -
Tsu06g00960 1334 MobiDBLite consensus disorder prediction 444 463 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00960 - - cam:101490739 1464.51