Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00959 ATGAATATGAAGTTTGCAGGGTATTCTATTTCCATTTCCGTTTCATTTTCTCCTTTAAGTTCAAATTTCATCAGAAATAGTTGTGGATTTCCGGTGAGTATATCTCGAAGAAGCCGAAGAAATTTATGCTGTTCAAGATTGTTTTCTGTGAATCAACATTCATATGATAAACCTGGAGCAGTTGCCAAACACTACCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGACTGGACAGACAATCATTATAGAACTCTAGCACGACTCATATCAAAGCATGCTTGGCTGTACACCGAGATGCTTGCAGCTGAAACAATTGTTCATCAAAAGGATAATCTGGACAGATTCTTGGCATATTCTCCGGAACAACATCCCATTGTGCTTCAAattggagggagtaatatagAAAATTTGGCAAAAGCAACCAAACTAGCTAATGCTTATGACTATGATGAGATCAATTTAAAcTGTGGATGCCCAAGTCCAAAAGTAGCTGGACATGGGTGCTTTGGTGTAAGTCTTATGCTTGACCCGAAGTTTGTTGGCGAGGCTATGTCAGCAATTGCTGCAAATACAAATGTACCTGTCAGTGTCAAATGTCGAATTGGTGTGGATGACCACGATTCTTACGATGAACTATGTGATTTCATATTCAAGGTTTCTTCTTTATCACCCACTAAGCATTTCATAATTCACTCAAGAAAAGCACTGCTCAATGGAATTAGCCCAGCTGAAAATAGGAGTATTCCTCCGCTAAAATATGAATACTTTTATGGCCTTTTACGCGACTTTCCAGATTTAACATTTACAATAAATGGGGGTATTGCTAGTGTTGATGAGGTCAATGCAGCTCGAGAAGCTGGGGCTCATGGTGTTATGATTGGACGGGCAGCATACAATAACCCTTGGAATATATTGGGACATGTTGATACTGAAATTTACGGTGTACCAAGCTGTGGTCTTACACGTCGTCAGGTTCTTGAAAAATATGCAATCTATGGAGACTCGGTATTGGGAAAATATGGACATAAGCCAAATGTACGAGACATTGTGAAGCCTTTACTTCATTTTTTCCATTCAGCACCTGGGAATGGACAGTGGAAGCGCAATGCAGATGCTGCTTTTAGAAATTGCACGacaataaaatcattttttgaagaaaccCTTGAAGCTATTCCTGACTCGGTCTTGGATTCACCTGTTTCGGAACCACCTCCTGGCCGTACAGATCTTTTTGCTAATATAGACAGTTTACTGCCTACTCCATACGaaacaaaagaagaagttgTTTTATGCGCATAG 1302 0.384 MNMKFAGYSISISVSFSPLSSNFIRNSCGFPVSISRRSRRNLCCSRLFSVNQHSYDKPGAVAKHYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPEQHPIVLQIGGSNIENLAKATKLANAYDYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGIASVDEVNAAREAGAHGVMIGRAAYNNPWNILGHVDTEIYGVPSCGLTRRQVLEKYAIYGDSVLGKYGHKPNVRDIVKPLLHFFHSAPGNGQWKRNADAAFRNCTTIKSFFEETLEAIPDSVLDSPVSEPPPGRTDLFANIDSLLPTPYETKEEVVLCA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00959 433 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 61 431 - -
Tsu06g00959 433 CDD DUS_like_FMN 70 303 IPR035587 -
Tsu06g00959 433 Pfam Dihydrouridine synthase (Dus) 72 380 IPR035587 -
Tsu06g00959 433 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 61 431 IPR004653 GO:0002943|GO:0017150
Tsu06g00959 433 SUPERFAMILY FMN-linked oxidoreductases 69 370 - -
Tsu06g00959 433 Gene3D Aldolase class I 66 309 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00959 Tsu-Chr6 8724290 8729687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00959 K05539 - gmx:100779457 717.227