Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00954 ATGGGTTTTCTTCTTCTAAGATTATcattttctagttttttattagtaCTAGGTTTGGTTTTGAATTTGGTTTTTGTGTGTAATGGAGGTACATCTAGTACTTTTGTTAGAAAAGTTGAGAAAGCCATTGATATGCCACTTGATagtgatgtttttgatgttccTTCTGGTTATAATGCTCCTCAACAGGTTCATATAACACAAGGTGATCTTGAGGGGAGAGCAGTAATCGTGTCGTGGGTGACTGAGGATGAACCAGGGTCGAACGCAGTACGTTACTGGAGTGAGAACAGCAAACATAAGAAGCTAGCTACAGGGAAAGTTGTAACTTATAGATACTTCAATTACACATCTGGTTTTATTCATCACACTACTATTAGGAATTTGAAGTACGACACCAAATATTACTATGAGGTTGGACTTGGGAATACAACAAGGCAGTTTTGGTTTACAACTCCTCCGGAAATTGGTCCTGATGTTCCATACACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAACACGACACTTTCACACTATGAATCGAACCCAACAAAAGGGCAAACAGTGTTGTTTGTTGGAGATCTCTCATATGCAGATAACTACCCGAATCATGACAATGTTAGATGGGATACTTGGGGAAGGTTTGCAGAGAGGAGCGTTGCTTATCAACCGTGGATATGGACTGTAGGAAACCACGAAATTGATTTTGCTCCAGAAATCGGCGAAACCAAACCATTCAAGCCTTATTCACACCGATACCGTACTCCTTATAAAGCATCACAAAGTACTTCACCATTTTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGGCCTCATATTCAGCATATGGAAAATATACGCCACAATACAAATGGCTTGAACAAGAGCTACCAAAGGTTAACAGGACAGAAACTCCTTGGTTGATTGTTCTAATGCATTCACCTTGGTACAATAGCTACAATTATCATTATATGGAAGGGGAAACAATGAGAGTAATGTATGAGCCATGGTTTGTTAAGTACAAGGTCGATGTTGTCTATGCTGGCCATGTGCATGCCTATGAACGTTCCGAACGTGTCTCGAATATTGCATATAATATTGTAAATGGTATTTGCGCTCCTGTAAAAGATCAATCAGCTCCTGTATACATAACCATTGGAGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAACCAAGTTACTCAGCATTCAGAGAAGCCAGCTTTGGACATGCCATTTTCGACATAAAGAATAGAACACATGCTTACTATAGTTGGCATAGAAATCAAGATGGTGACGCTGTTGAGGCTGATTCCCTTTGGTTTTTCAACAGATTCTGGAACCCAGTTGATGATTCCACTGGCCATGGTTCCCATTAA 1416 0.3919 MGFLLLRLSFSSFLLVLGLVLNLVFVCNGGTSSTFVRKVEKAIDMPLDSDVFDVPSGYNAPQQVHITQGDLEGRAVIVSWVTEDEPGSNAVRYWSENSKHKKLATGKVVTYRYFNYTSGFIHHTTIRNLKYDTKYYYEVGLGNTTRQFWFTTPPEIGPDVPYTFGLIGDLGQSFDSNTTLSHYESNPTKGQTVLFVGDLSYADNYPNHDNVRWDTWGRFAERSVAYQPWIWTVGNHEIDFAPEIGETKPFKPYSHRYRTPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEQELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVYAGHVHAYERSERVSNIAYNIVNGICAPVKDQSAPVYITIGDGGNLEGLATNMTEPQPSYSAFREASFGHAIFDIKNRTHAYYSWHRNQDGDAVEADSLWFFNRFWNPVDDSTGHGSH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00954 471 PANTHER ACID PHOSPHATASE RELATED 13 467 IPR039331 GO:0003993
Tsu06g00954 471 Pfam Calcineurin-like phosphoesterase 163 361 IPR004843 GO:0016787
Tsu06g00954 471 Gene3D - 60 156 - -
Tsu06g00954 471 Pfam Iron/zinc purple acid phosphatase-like protein C 387 446 IPR025733 -
Tsu06g00954 471 PANTHER PURPLE ACID PHOSPHATASE 13 467 - -
Tsu06g00954 471 CDD MPP_PAPs 158 456 IPR041792 -
Tsu06g00954 471 Gene3D - 157 466 IPR029052 -
Tsu06g00954 471 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 154 IPR008963 GO:0003993|GO:0046872
Tsu06g00954 471 Pfam Purple acid Phosphatase, N-terminal domain 61 152 IPR015914 GO:0003993|GO:0046872
Tsu06g00954 471 SUPERFAMILY Metallo-dependent phosphatases 158 465 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00954 Tsu-Chr6 8697049 8702084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00954 48 446 Miscellaneous Gene Families AT1G13900 24.190 1.35e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00954 K22390 - gmx:100807555 877.085