Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00936 ATGACTCTCCTCACTTTCCCGCATTTTCCTTCCAATTTTCCCTCACTTTCCCGTTTCCCTAACAACCGTTTCTCTCCAACTCGCCGTTATTGCTTAACCACCACAACCGCACCATCATCCAACACCGCCATTCTCTGGTTTAAGCACGATCTCCGAACAGACGACCATCCTGGACTTCTCGCAGCGTCCAAATTTCAATCCATTGTTCCTGTTTACGTTTTTGATCACCGCATTCTTTCTCGCTTTTCCGATGAAATGCTTGAACTGATTCTGTTCGCTTTGCAAGATTTGAGGAAGTCGTTGCGGGATCGTGGTTCCGATCTCATGATTAGGTTTGGCAATGCTGAGAATGTCATACAGAACCTTGCAGCAGAGGTCCAAGCCACTTGTATATTTGCGGAACAAGAGGTGGAGTATGAACTGCTCTTCATCATGGATGTTGTCAACCAGCGTTTGAATTCGATGAAGGTTTCACAAGGCACTCCAAAAATTGAATTGTGGAAGACTCCATTTTATGATATAAAGGTGCTGCAAAATCTTCCTGCATCGTATGGCGACTTTGAGAAACTTCGGCTCCACGTGACTACACCACTTCAGCTTTCAACGCTACCTGGTGCAGAAATGGAACTAGACTGGGGTGATCTTCCCGTTTATGATGATATTAAGGGATTTATGGCTAAGAACCAACATAAATCAAGAGATGATTGGAATTTGATCAAGGAGACATCAGCTGATACCTTGTTAGGCAGAGAAATGTTGAAGTCTAGTGAGAGTGGGGAAAGAAGTTATAGCTTTAGGCAGATGCGGTCAAGCGAATCAAATGAATCTGTGTTTGTTACACAAAAAGGAAATGTTGTAGGAGGTGGAACATATAATGTACTGAATGCATTGGCTGCATATTTGAGGTATTTGGAGGGAACGGCTCGTGAAGATTGGCAAGAGGTACATGCAAAACTGCGTGCTTCAGAAAGTCGAAATGGAGCATCATTTAACGCGCTATTTGGTCCTGCCCTGACTCTGGGCATTATATCTAGAAGAAGAGTACACTATGAAGTTATCAAatatgagaaagaaagaaatggtGGATTCATACCTCCCTTTGGATATTCAACTGCGACCATTGAAGCAGCAGCTGAGGCTGTGCTTTCAAAGGAGTGGTATTGGCTTTTGGCTTTGAGAAATCAGATAAATAATGATGAAAAACAGTCAACACGGATATGGAGATGGAATGGTTTTCTTATTCAGTATACAGTTGCTGGTGAAGATGGTCCTGCTGTTCTTCTTGTGCATGGTTTTGGTGCCTTTGCAGAGCACTACCGTGACAACATACACGGTTTAGCTAGAGCTGGAAATCGAGTTTGGGCTATTACATTGTTAGGATTTGGCAAATCAGAAAAGCCAAATACTGTATACACTGAGCTATTGTGGGCTGAACTATTGAGAGATTTTATTGTTGATGTTGTGGGGGAACCGGTCCACCTTGTTGGTAACTCAATTGGTGGTTACATTGTTGCTATTGTTTCTCGAGTTTGGAGTATTTTGATCAAATCCACCGTCTTGATCAACAGTGCTGGCAATGTTATCCCAAGAATTACATCCTTATCGTTGTATAGGCCAAGTGATAGACAAACGTCAGGAGCTACATGGTTGGGTTCTCGCATTCTTCTATTTTTCTTGAGGCTAACAATTCAAGACATTGTTAAGAAATGTTATCCAACTAAGGTTGAAAGGGCAGATGATTGGCTAATAAATGAAATGCTAAGAGCATCTTACGACCCTGGTGTGCCTGTGGTCTTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCGCTTAACTATCTTCTCGAAGATGTCAAGGAAAAGGTTCTAATTATACAGgGAATGAAAGATCCAATTTCTGATTCCAAAGCCACTGTGGCTATGCTTAAAGAGCATTGTGATGGTGTTATAGTTAAGGAATTAGATGCCgGCCATTGTCCTCATGACGAGGTGCCAGAATCAGTTAATACTATCATTTGTGGTTGGATACAGAAAGTGGAAAGCAACATTTTAGCAGGGTTCccagtgtaa 2070 0.4145 MTLLTFPHFPSNFPSLSRFPNNRFSPTRRYCLTTTTAPSSNTAILWFKHDLRTDDHPGLLAASKFQSIVPVYVFDHRILSRFSDEMLELILFALQDLRKSLRDRGSDLMIRFGNAENVIQNLAAEVQATCIFAEQEVEYELLFIMDVVNQRLNSMKVSQGTPKIELWKTPFYDIKVLQNLPASYGDFEKLRLHVTTPLQLSTLPGAEMELDWGDLPVYDDIKGFMAKNQHKSRDDWNLIKETSADTLLGREMLKSSESGERSYSFRQMRSSESNESVFVTQKGNVVGGGTYNVLNALAAYLRYLEGTAREDWQEVHAKLRASESRNGASFNALFGPALTLGIISRRRVHYEVIKYEKERNGGFIPPFGYSTATIEAAAEAVLSKEWYWLLALRNQINNDEKQSTRIWRWNGFLIQYTVAGEDGPAVLLVHGFGAFAEHYRDNIHGLARAGNRVWAITLLGFGKSEKPNTVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYIVAIVSRVWSILIKSTVLINSAGNVIPRITSLSLYRPSDRQTSGATWLGSRILLFFLRLTIQDIVKKCYPTKVERADDWLINEMLRASYDPGVPVVLESIFSFNLSIPLNYLLEDVKEKVLIIQGMKDPISDSKATVAMLKEHCDGVIVKELDAGHCPHDEVPESVNTIICGWIQKVESNILAGFPV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00936 689 Pfam DNA photolyase 44 156 IPR006050 -
Tsu06g00936 689 PANTHER DNA PHOTOLYASE 34 683 - -
Tsu06g00936 689 Gene3D HUPs 23 179 IPR014729 -
Tsu06g00936 689 SUPERFAMILY alpha/beta-Hydrolases 401 679 IPR029058 -
Tsu06g00936 689 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 42 220 IPR036155 -
Tsu06g00936 689 Pfam Alpha/beta hydrolase family 426 668 IPR000073 -
Tsu06g00936 689 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 41 174 IPR006050 -
Tsu06g00936 689 Gene3D alpha/beta hydrolase 391 682 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00936 Tsu-Chr6 8455138 8461128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00936 408 470 Acyl Lipid Metabolism Gene Families AT2G26740 42.188 5.40e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00936 - - gmx:100813721 1059.28