Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00921 ATGGGTTTAGAGCAAAGGTTTGTGATGGTAGTGATTTGTATCCTTTTGGGTGTAAGTGAAAGATGCATGGGTTTGAAGCATAATTATGGAGAAGCATTGGCAAAGAGCATATTGTTCTTTGAAGGGCAAAGGTCAGGGAAGTTACCATCAACACAAAGGATGAGTTGGAGGAAGGATTCTGCTTTTGGTGATGGTTTTCAACTTGATGATGATAGATTCTTTGATAAAGTTGACTTGGTTGGTGGTTACTATGATGCTGGTGACAATGTGAAATTCAATTTCCCAATGGCATTTTCAACAACAATGTTAGCATGGAGTGTAATAGAGTTTGGAAAATTCATGGGTCCAGAACTTAACAATGCACTTGATGCAATAGGTTGGGCCACTGATTATTTGTTAAAAGCCACAAATACCCCTGGATTTGTTTTTGCACAAGTTGGTGACCCATTTGGTGATCATAATTGTTGGGAGAGACCTGAAGATATGGATACTCCTAGAACTTCATTTTTTGTTAGTAAAGAGAATCCTGGATCTGAAGTTTCAGCTGAAATTGCAGCTGCACTTTCTGCTTCTTCTATTGCTTTTAAGAAATTTAAGCATAATGTAGGATATTCTGAAAGGCTTCTCCAAAGGGCTATAATGGTTTTCGAATTTGCAGATAAATATAGAGGATCATACAATGACAGCCTTGGTCCATTTGTGTGCCCATTCTACTGTGATTATGGTGGTTACCAGGACGAATTGGTGTGGGGAGCAGCATGGTTACTGAAGGCTACTAAGCTACCTAATTACTGGAATTACATTAAACAAAACATTCATAATGTGAAAAATTATGGTGAATTTGGATGGGACTCAAAGGATGCTGGCATAAATGTTCTAATTTCTAAGCTTCTAGTTAATAATCCAGCTTCTAAGCCTTTTAACCTCAATGCTGATAAGTTTATATGTGCTGTGCTACCTGAATCACCCTTAGTTTCAGTCTCATACTCGCGaggTGGACTTCTATTCAAGACTAGTGGGAGTAACTTGCAGCATGCAACATCATACTCATTTCTTTTGATGGTTTATGCTGGATATTTGAATACTGCAAATAAAAAGATTGATTGTGGTGGTGGAGTTTTGGCTTCTTCAAGGAGACTTAAACAATTAGCAAGAAGCCAGGTAGATTACATACTTGGAAGCAACCCATTGAGTATGTCATACATGGTTGGATATGGACAAAAATTTCCCCAAAGAATACATCATCGTGCTTCATCATTGCCTTCCATAGATCAACATCCTAGCAAAATCAATTGCAAAGGAGGATCCATTTATTTTGAAACCCAAAATCCAAATCCCAATTTGCTTATAGGAGCTGTTGTTGGAGGACCTAATATCAATGATGAATATGTTGATTCTAGAGCTGATTTTGTACACTCAGAACCTACAACATATATCAATGCACCTCTTGTTGGTGTTTTGGCTTATTTTAAATCACATCCATTATAA 1488 0.3737 MGLEQRFVMVVICILLGVSERCMGLKHNYGEALAKSILFFEGQRSGKLPSTQRMSWRKDSAFGDGFQLDDDRFFDKVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVIEFGKFMGPELNNALDAIGWATDYLLKATNTPGFVFAQVGDPFGDHNCWERPEDMDTPRTSFFVSKENPGSEVSAEIAAALSASSIAFKKFKHNVGYSERLLQRAIMVFEFADKYRGSYNDSLGPFVCPFYCDYGGYQDELVWGAAWLLKATKLPNYWNYIKQNIHNVKNYGEFGWDSKDAGINVLISKLLVNNPASKPFNLNADKFICAVLPESPLVSVSYSRGGLLFKTSGSNLQHATSYSFLLMVYAGYLNTANKKIDCGGGVLASSRRLKQLARSQVDYILGSNPLSMSYMVGYGQKFPQRIHHRASSLPSIDQHPSKINCKGGSIYFETQNPNPNLLIGAVVGGPNINDEYVDSRADFVHSEPTTYINAPLVGVLAYFKSHPL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00921 495 Pfam Glycosyl hydrolase family 9 29 487 IPR001701 GO:0004553|GO:0005975
Tsu06g00921 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Tsu06g00921 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Tsu06g00921 495 Gene3D - 24 494 IPR012341 GO:0005975
Tsu06g00921 495 SUPERFAMILY Six-hairpin glycosidases 26 491 IPR008928 GO:0005975
Tsu06g00921 495 PANTHER ENDOGLUCANASE 10 494 - -
Tsu06g00921 495 PANTHER ENDO-1,4-BETA-GLUCANASE 10 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00921 Tsu-Chr6 8274914 8279233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00921 7 493 Glycoside Hydrolase AT1G70710 58.943 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00921 K01179 - gmx:100775752 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00921 06 8274914 8279233 Tsu06g00921 06 8274914 8279233 ECH