Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00919 ATGATGATGGCTACAATGGCAAGATCAGCTTCACTTGACTATGGTGATGCATTGACAaaaagtattttgttttttgaaggTCAAAGGTCCGGAAAATTGCCACCTTCTCAACGTATGAAATGGAGAAAAGATTCTGCTCTTAATGATGGACATGATATTCATATGAATATGGTTGGTGGATACTATGATGCTGGTGACAATGTAAAATTCCATTTTCCTATGGCATTTACAACCACAATGCTAGCTTGGAGTGTGATAGAATTTGGAGATCATATGGGATCAGATTTACAACATGCATTGGAAGCAATTCGTTGGGGAACTGATTATTTCCTCAAAGCCACAAGAATTCCAAATGTTGTTGTAGCACAAATTGGAGATCCCATCAGTGATCATGATTGTTGGGAAAGACCAGAAGATATGGACACTTCTAGAAAAGCTTATTATTTGACTCAAAGGAAGCCCGGTTCAGAGGTTTCAGCTGAGATTGCGGCTGCACTTGCGGCGTCATCTATCGTATTTCGTAAAATCGATGGCAAATATTCTAAAGCGCTTCTCATTAGGGCTAAACTGGTGTTTGACTTTGCAAATAATCACCGTGGCTCTTACAATGATTCCATAGGTGCTGGAGCATGTCCCTTCTATTGTGATTTCAATGGTTACATGGATGAGTTGATTTGGGGTGCAGCATGGTTGCATAAGGCTTCTAATGATCAAAATTATTGGAATTTTGTAAAATCAAATATACTATCCTTAGAATCCACTTCTAATGGTGGTAGTTTTAGTGAATTTGGATGGGATTCTAAGAATGCTGGCATCAATGTTCTTGTTTCTGAGGGGGTGATGAATAATCCATCAAATGAGAATCCATTTGTTCCTAATGCAAACAATCTAATATGCTCTTTGTTGCCCAATTCACCAACCAAATCAGTCACATACTCTAAAGGTGGGCTTCTATTCAAAGTTGGATCAAGTAACCTACAACATGCAACAtcactttcttttttgttaattgtttatGCTCGCTACATGCAAGCTAACAACAAAGTAGTACAATGTGGAAATGTAATTGCTAAACCATCTGATCTCACTAATCTTGCAAAAAGCCAGGTTGACTATATTTTAGGAAACAATCCACTAGGAATGTCGTACATGGTTGGCTACGGACAAAAATATCCTCAGAAGATACATCACCGTGGTTCAACTTTGCCATCAATTGATGTGAACCCAAATCATATGGGGTGTCGTGATGGAGACAAGTATTTTCAATCATCAGAACCTAATATAAACGAACTAATAGGTGCAATTGTTGGAGGACCAGCGGATGATGATTCTTTTCAGGACTCGCGATATAATGTTTCTCAATCAGAGCCAACTACATATATCAATGCTccttttgttggtgttttggcTTACTTCAAATAA 1422 0.3678 MMMATMARSASLDYGDALTKSILFFEGQRSGKLPPSQRMKWRKDSALNDGHDIHMNMVGGYYDAGDNVKFHFPMAFTTTMLAWSVIEFGDHMGSDLQHALEAIRWGTDYFLKATRIPNVVVAQIGDPISDHDCWERPEDMDTSRKAYYLTQRKPGSEVSAEIAAALAASSIVFRKIDGKYSKALLIRAKLVFDFANNHRGSYNDSIGAGACPFYCDFNGYMDELIWGAAWLHKASNDQNYWNFVKSNILSLESTSNGGSFSEFGWDSKNAGINVLVSEGVMNNPSNENPFVPNANNLICSLLPNSPTKSVTYSKGGLLFKVGSSNLQHATSLSFLLIVYARYMQANNKVVQCGNVIAKPSDLTNLAKSQVDYILGNNPLGMSYMVGYGQKYPQKIHHRGSTLPSIDVNPNHMGCRDGDKYFQSSEPNINELIGAIVGGPADDDSFQDSRYNVSQSEPTTYINAPFVGVLAYFK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00919 473 Gene3D - 10 473 IPR012341 GO:0005975
Tsu06g00919 473 PANTHER ENDO-1,4-BETA-GLUCANASE 1 473 - -
Tsu06g00919 473 Pfam Glycosyl hydrolase family 9 14 469 IPR001701 GO:0004553|GO:0005975
Tsu06g00919 473 SUPERFAMILY Six-hairpin glycosidases 13 472 IPR008928 GO:0005975
Tsu06g00919 473 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 372 398 IPR018221 -
Tsu06g00919 473 PANTHER ENDOGLUCANASE 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00919 Tsu-Chr6 8253575 8256718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00919 9 472 Glycoside Hydrolase AT1G70710 60.215 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00919 K01179 - gmx:100814370 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00919 06 8253575 8256718 Tsu06g00919 06 8253575 8256718 ECH