Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00889 atgagggtAAAGCCAGTTTCAGCAAAAACCATTTTGTTCCTATGCGTTGCTTGCTTTCTGGCTGGAACACTTTTCACTGGCCAAATGTGGACAAGCCCCTCCTCCAACCATGAAAGTCCAGTGCTACCGACCAGACACAACGGTGTTCTCAAACGAAAAATAATTGAAGGTGAATCAGGAGATGTAATGGAGGAAGTCACAAAGACTCATCAAGCTATCAAGTCTTTGGACAAGGCAATTTCAACATTGGGAATGGAATTGACAGCATCTAAGACAAGCCAAACTAGTGGGCAGGGGCAGCATTTGAGACAACATAGTTCTAACCATAGTATTCAGAAAGCTTTTGTGGTGATCGGTATTAACACCGCCTTTAGCAGTAGAAAACGACGAGACTCAATACGCGAAACATGGTTGCCTAAAGGAGATAAGCTTAAGCAACTAGAGAAAGAGAAGGGAATTGTTGTAAGGTTCATGATTGGTCATAGCACAACACTAGGAAGCATTCTTGATAAATCaattgatgaagaagatgcAGAACATCATGATTTTCTTAGGTTAGACCATATTGAAGGGTACCATGAATTGTCCACCAAGACAAGACTCTTCTTTTCTACGGTTACATCTATGTGGGATGCTGAATTCTATGTCAAGATTGATGATGATATCCATTTAAATCTTGGCGTGCTAGTGAATACACTTGCAAAGTACAGATCAAGGCCCAGGGTTTATATTGGTTGCATGAAATCAGGCCCAGTTCTATATCAAAAAGGTGTAAAGTATCATGAAGCTGAGTATTGGAAGTTTGGGGATGAAGGGAACAGATATTTCAGGCATGCCACAGGACAAATATATGCCATCTCTAGGGATCTTGCTGGCTATATATCTATCAATTGGCCCATATTGCATAGATATGCAAATGAAGATGTATCTCTTGGAACATGGTTATTGGGCTTAGAAGTTGAAATGGTTGATGAACGATCCATGTGTTGTGGGACACCCCCAGATTGTGAATGGAAAGCGAGATCTGGAAACATGTGTGTGGCTTCTTATGACTGGAAATGCAGTGGCATCTGCAAATCTGTGGAGAGAATGAAGGATGTTCACAAAGCTTGCGGGGAGGGAGATGGAGCTGTTTGGAATGTTGAAATATAA 1152 0.4054 MRVKPVSAKTILFLCVACFLAGTLFTGQMWTSPSSNHESPVLPTRHNGVLKRKIIEGESGDVMEEVTKTHQAIKSLDKAISTLGMELTASKTSQTSGQGQHLRQHSSNHSIQKAFVVIGINTAFSSRKRRDSIRETWLPKGDKLKQLEKEKGIVVRFMIGHSTTLGSILDKSIDEEDAEHHDFLRLDHIEGYHELSTKTRLFFSTVTSMWDAEFYVKIDDDIHLNLGVLVNTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEYWKFGDEGNRYFRHATGQIYAISRDLAGYISINWPILHRYANEDVSLGTWLLGLEVEMVDERSMCCGTPPDCEWKARSGNMCVASYDWKCSGICKSVERMKDVHKACGEGDGAVWNVEI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00889 383 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 5 374 - -
Tsu06g00889 383 Pfam Domain of unknown function (DUF4094) 7 92 IPR025298 -
Tsu06g00889 383 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 5 374 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu06g00889 383 Pfam Galactosyltransferase 128 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu06g00889 383 Gene3D - 103 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00889 Tsu-Chr6 7978539 7981847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00889 6 380 Glycosyltransferase AT1G77810 60.677 3.42e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00889 K20855 - gmx:100776291 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00889 06 7978539 7981847 Tsu06g00889 06 7978539 7981847 ECH