Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00887 atgTTTGTTCTAATTTCAACAACTCAAACTTTCATATTATATTTTGCTAAATTATTTTCCAAAATTCAAATGAAGGAAAAGGGTATATTGAaatatgtgatgatgatgattctagTTATAGTGTTGCTATGTTGTTATGGGGTTGCTAATGTGAACTCACAAAGGGTTCCTCCTGCTTTGTTTATATTTGGAGATTCACTTGTTGATGTTGGTAACAATAATCACTTAAATACCATAGCAAAATCAAATTTCTATCCATATGGTATTGATTACAATAGGGGTTCTACAGGCAGATTCTCTAATGGAAAATCCTTCACTGATTTCATTgGAGATATGTTGGGTGTTCCTTCTCCTCCACCATTTTTAGACTCTTCTACTACTGGACAGAACATGCTTAATGGAATCAATTATGCATCTGCTTCTGGTGGTATTCTTGATGATTCAGGGAGACACTTTGGTGATAGGCATAGCATGAGCAGGCAAATCCAGAACTTTGAGAGAACATTGAATCAATATAGGACAATGATGAATGCAACTACATTGAATCAATTCTTAGCTAAGTCTATAGTGATTGTTGTGACTGGAAACAATGACTACATCAACAACTACCTCCTACCTGGATTTTATGGCACTAGTAGAAATTATACTGCCCCTCAATTTGCCAATCTTCTTCTCAATACATTTGCAAGACAACTTCTGGCACTACAGAGTTTAGGATTAAGGAGGTTCTTCTTGGCAGGAATTGGACCACTTGGTTGCATTCCTAATCAAAGAGCAAGGGGTTTAGCCCCATCTGGAAGATGTGTTGATTCAGTAAATCAAATGGTTGGAACTTATAATGGAGGACTGAGATCATTGGTGGAACAACTTAATAGAGATCATTCTGATTCCATATTTGTATATGGAAACACTTATAATGTCTTTGGTGATATACTTAATCACCCTACTGCCTATGCATTTACTGTTATTGATAGAGCTTGTTGTGGTATTGGACTAAACAGAGGACAAATATCATGTCTTCCATTGCAATTGCCATGTTTAAACAGAGATCAATATGTATTTTGGGATGCTTTTCACCCAACACAATCTGCAATTTATGTATTTGCTTGGAGAGCTGTTAATGGTCCACAAAGTGATTGTTATCCTATTAATATTAAACAAATGGCTCTCATGTAG 1176 0.3486 MFVLISTTQTFILYFAKLFSKIQMKEKGILKYVMMMILVIVLLCCYGVANVNSQRVPPALFIFGDSLVDVGNNNHLNTIAKSNFYPYGIDYNRGSTGRFSNGKSFTDFIGDMLGVPSPPPFLDSSTTGQNMLNGINYASASGGILDDSGRHFGDRHSMSRQIQNFERTLNQYRTMMNATTLNQFLAKSIVIVVTGNNDYINNYLLPGFYGTSRNYTAPQFANLLLNTFARQLLALQSLGLRRFFLAGIGPLGCIPNQRARGLAPSGRCVDSVNQMVGTYNGGLRSLVEQLNRDHSDSIFVYGNTYNVFGDILNHPTAYAFTVIDRACCGIGLNRGQISCLPLQLPCLNRDQYVFWDAFHPTQSAIYVFAWRAVNGPQSDCYPINIKQMALM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00887 391 Pfam GDSL-like Lipase/Acylhydrolase 60 364 IPR001087 GO:0016788
Tsu06g00887 391 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 37 390 - -
Tsu06g00887 391 CDD SGNH_plant_lipase_like 58 376 IPR035669 -
Tsu06g00887 391 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 37 390 - -
Tsu06g00887 391 Gene3D SGNH hydrolase 47 377 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00887 Tsu-Chr6 7958603 7961950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00887 58 388 Acyl Lipid Metabolism Gene Families AT4G10950 33.634 8.31e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00887 - - gmx:100782184 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00887 06 7958603 7961950 Tsu06g00887 06 7958603 7961950 ECH