Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00879 ATGAATTCTAACATCATGAATTTCTCTAccgcttcttcatcatcattaatcaGAGTGTTTAATCCATCTCCAAATAATAATCATAAGCTACAAAAAGCGCGTTCATATTCTTCAGTTACTATTACTCATCACCACCACCGTCAACTTTCTCTCCGTTCTTCTTCACGATCCCTTTCTTATTCTTCTACGATTGTGAAGGCGGCAGCAGCGGCGGTGCAGACGGAAGAGCCACTTCATGTTATGATTTCCGGTGCACCTGCTTCTGGTAAAGGAACTCAATGTCACCTTATTACCAACAAATACGGTTTGGTGCATGTTGCTGCTGGAGATTTACTAAGGGCAGAAATTGAAACCGGAAGTGAAAATGGAAAGCGTGCGAAAGAATATATGGAGAAGGGACAGTTGGTCCCTGATGAAATAGTTGTCATGATGGTCAGGGATCGTCTCTTGAAGCCAGATTCTGCAGAGAATGGTTGGCTTTTGGATGGATATCCCAGGAGCTTATCACAGGCTACTGCACTTAAGGAATTAGGCTTTAAAcctgatatttttattcttttagagGTCTCTGAAGATATTCTTGTGGAGAGAGTAGTTGGAAGGAGGTTAGATCCTGTTACTGGGAAGATATATCATTTGAAGTATTCTCCTccagaaacaaaagaaattgcCGATAGGCTTACCCAACGTTTTGATGATACTGAAGAGAAGGTAAAGTTGCGATTGAACACCCACCATCAAAATGTGGAGGCAGTCCTTTCAATGTACAAAGATATAACCATTAAGATTAATGGAAATGCCTCTCAGGAGGAAGTATTTGCTCAAATTGATGGTGCACTTACAACTCTTCTAGAGCAAAGGAAAACATCTTCAGAATCTATGGTAGCATAG 891 0.3816 MNSNIMNFSTASSSSLIRVFNPSPNNNHKLQKARSYSSVTITHHHHRQLSLRSSSRSLSYSSTIVKAAAAAVQTEEPLHVMISGAPASGKGTQCHLITNKYGLVHVAAGDLLRAEIETGSENGKRAKEYMEKGQLVPDEIVVMMVRDRLLKPDSAENGWLLDGYPRSLSQATALKELGFKPDIFILLEVSEDILVERVVGRRLDPVTGKIYHLKYSPPETKEIADRLTQRFDDTEEKVKLRLNTHHQNVEAVLSMYKDITIKINGNASQEEVFAQIDGALTTLLEQRKTSSESMVA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00879 296 PRINTS Adenylate kinase signature 159 175 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu06g00879 296 PRINTS Adenylate kinase signature 230 245 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu06g00879 296 PRINTS Adenylate kinase signature 109 123 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu06g00879 296 PRINTS Adenylate kinase signature 81 94 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu06g00879 296 PANTHER ADENYLATE KINASE 8 34 287 - -
Tsu06g00879 296 PANTHER NUCLEOTIDE KINASE 34 287 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu06g00879 296 ProSitePatterns Adenylate kinase signature. 159 170 IPR033690 -
Tsu06g00879 296 Gene3D - 74 294 IPR027417 -
Tsu06g00879 296 TIGRFAM adk: adenylate kinase 80 279 IPR006259 GO:0004017|GO:0005524|GO:0016776
Tsu06g00879 296 Pfam Adenylate kinase 82 258 - -
Tsu06g00879 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 283 IPR027417 -
Tsu06g00879 296 Hamap Adenylate kinase [adk]. 78 281 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu06g00879 296 CDD ADK 80 272 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00879 Tsu-Chr6 7865807 7871534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00879 K00939 - gmx:100784319 389.423