Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00865 ATGGAGGAATCAAACGAAGTTTTGTTAGAAGCTGAATTAGCACTTGTAGATGGTGTTGTTGATTACAAAGGTCAACCTGCCATTAGATCCAAATCTGGTTATTGGAGATCAGCCTGGTTTATCATAGGTGTGGAAGTGGCAGAGAGAGTGTCACATTATGGAATACAAGGGAACTTGATATCATATCTAACAGGACCACTCCAACAGAGTACTGCAACTGCTGCTGAAAATGTGAATATATGGGCTGGAACtgcttctcttcttcctctatTTGGTGCTTTCATTGCTGATTCTTTTCTTGGACGCTACCGCACAATCATAATTGCTTCTCTCATCTATATCTTGGGACTAAGCTTGTTAACATTATCAGCTATGCTTCCTTCCCTAATCAAATCTAAATGTCAAGTAAACAATACATTCATATTCTGCTCCCAACATTCACAAGTaatcttattcttcttctcaCTCTATCTAGTTGCCATTGGACAAAGCGGACATAAACCTTGTGTTCAAGCTTTCGGGGCAGATCAATTTGACGATAAACATCCTAACGAGCTCAGAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACAATCGTTGCAGTTTGCTCGGCAACAATTTTAGTCTTGACGTATATACAAGATAACTTTAGTTGGGTTCTTGGATTTGGAATCCCTTGTGTTGTAATGATCATTGGTATGAttgttttctttcttggaaCAATGACCTATAGGTTTAACATTAAGGATAATGCCAAGAGTCCCTTTCTTAGAATTGGTCGCGTATTTGTTTCGGCTGTAAGAAATTGGCGAACTACCTTACCAAGCACATctattgaagaagaaagtggTGGAATAGTTCTCCGTCAAGGTTCTAAACAATTCAACTTCCTCAACAAGGCATTACTAACACCAAAGGGATCCAATGAAGATGAAACGTGTACCCTTAATGAGGTAGAAGAAGCAAAGGCGGTACTAAGGTTAATTCCAATTTGGGCTACAACTTTGGTTTATGGTATTGTCTTTGCTCAAGTTTTTACATTCTTTACCAAACAAGGAAAATCTATGGAGAGAACAATATTTCCTGGTTTTGACATACCTCCGGCTTCTCTTCAAACGATTACCGGTATCGCCATTGTTCTCATCAGTCCTGTCTACGACCGCATATTCGTGCCAGTAACAAGATCTATCACTGGGAATCCCTCAGGCATCACAATGCTTCAAAGAATTGGCACCGGAATCTTTCTATCCATTTTCACAGTAGTAGTTGCAGCCCTTGTTGAGATTAAAAGACTAAAAACAGCACAAGAGTTTGATCTTGTTGATGATCCTACTGCAATTGTTCCAATGAGTATATGGTGGTTGGTTCCTCAATACTTTTTGTTTGGAATTTCCGAGGTTTTTACTATGGTTGGTCTTCAAGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGACTTGCACTCTATTTGAGTATTGTTGGTGTTGGAAGCTTTCTAAGTGGCTTTCTCATTTCTATGATAGAAAATATTACTGGCAAAGATGGACATGAAAGTTGGTTTAGTGACAATATCAATAAGGCTCATCTTGATTACTTTTATTGGCTACTTACTGGATTAAGTGTTTTGGGGTTTACTTTGTTCATTTACTTTTCAAAATCTTATGTTTATAATTGCAAAAGTATCATCACAGAAGGATAG 1713 0.3649 MEESNEVLLEAELALVDGVVDYKGQPAIRSKSGYWRSAWFIIGVEVAERVSHYGIQGNLISYLTGPLQQSTATAAENVNIWAGTASLLPLFGAFIADSFLGRYRTIIIASLIYILGLSLLTLSAMLPSLIKSKCQVNNTFIFCSQHSQVILFFFSLYLVAIGQSGHKPCVQAFGADQFDDKHPNELRARSSFFNWWYFTIVAVCSATILVLTYIQDNFSWVLGFGIPCVVMIIGMIVFFLGTMTYRFNIKDNAKSPFLRIGRVFVSAVRNWRTTLPSTSIEEESGGIVLRQGSKQFNFLNKALLTPKGSNEDETCTLNEVEEAKAVLRLIPIWATTLVYGIVFAQVFTFFTKQGKSMERTIFPGFDIPPASLQTITGIAIVLISPVYDRIFVPVTRSITGNPSGITMLQRIGTGIFLSIFTVVVAALVEIKRLKTAQEFDLVDDPTAIVPMSIWWLVPQYFLFGISEVFTMVGLQEFFYDQVPNELRSMGLALYLSIVGVGSFLSGFLISMIENITGKDGHESWFSDNINKAHLDYFYWLLTGLSVLGFTLFIYFSKSYVYNCKSIITEG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00865 570 Pfam POT family 103 524 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu06g00865 570 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 19 565 - -
Tsu06g00865 570 SUPERFAMILY MFS general substrate transporter 29 557 IPR036259 -
Tsu06g00865 570 Gene3D MFS general substrate transporter like domains 9 567 IPR036259 -
Tsu06g00865 570 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 92 116 IPR018456 GO:0006857|GO:0016020|GO:0022857
Tsu06g00865 570 CDD MFS_NPF5 35 561 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tsu06g00865 570 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 565 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00865 Tsu-Chr6 7728191 7731081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00865 10 560 Organic Solute Cotransporters AT1G22540 61.887 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00865 K14638 - gmx:100776720 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00865 06 7728191 7731081 Tsu06g00865 06 7728191 7731081 ECH