Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu06g00856 | ATGATGAACAAGTTGGTGGTGGAAGTTCATGATGCTAGTGACCTTATGCCAAAAGATGGAAAAGGTTTAGCTAACCCTTATGTTCAAATAACCTTTGATGAACAAGAAGTGAAGACACAAACCAAATACAAAGACATCAATCCttattttaatgaaaagttTGTTTTCAACATAAACACTTCAAGAGATCTTGGTCATAAAACAGTTGAAGTTTGTGTTTACAATCACAATGAGAAAAAACCAAGtagtaaaaaaaactttctTGGAAGAGTTAGAATCTCAGGTAATTCTATTCCTTTATCTGAATCTGAATCTATTATCAAACGATACCCTCTTGAACATTCAAAAGGAGATATTGCTTTAAAAATGATTGCTTTTCATGATCCTTTTGCTAATACACCTCCTTCTCCTAAACCTCACCCTCCTCAACAACATTCACAAGCAAAATCTAGTTCTTTTTTTGAAGAACATGATGAGTTTGACCATGATGATGAAATTCCTTTGCAAGAAATTAACACTAACATAAACATGGAAGATGAAGAAAACATGTTTAGTGATagtgagaaaaagaagaagaataagaagaaaaaagaaaaagaagttagAACTTTTCATTCCATTGGAACTGAGAAACCTTCTCATGGTCATGGTCATGGTCATGCTCATCCTCCTGCTTCTGCTTTTCCTCCTGTTAATCATGCTccaaagtttcaatcttttgTGCAACCAACAGTTGAAACACAAACAAGGGTTGATTTTGCAAAATCAGGACCACCAAATGTTATGTTAATGCAGATCCCAAAACAGAATCCTGAATATGCATTGACTGAAACAGCTCCACCACTTGCTGCTAGGTTGAGGTATAAAGGAGGGAATAAGGTATCAACAACTTATGATTTAGTTGAACAAATGCATTTTTTGTATGTCAATGTTGTGAAAGCAAAAGAACTTCCTAAGATGGATATCTCAGGTAGTGTTGATCCTTATGTTGAAGTGAAACTTGGTAACTACAAAGGTGTTACAAAGCATTTGGAGAAGAATCAGCATCCTGTTTGGAAGCAAATCTTTGCGTTTTCGAAGGATAGGTTGCAATCAAATTTACTTGAAGTTACTGTGAAGGATAAAGATCTTATCAGTAAAGATGATTTTGTTGGTAGGATTATGTTTGATCTCAATGAGGTACCGGTTAGGGTTCCGCCCGATAGTCCTTTGGCTCCTCAGTGGTATAGACTGGAGGATAAAAAGGGGATGAAGATAGAGGATGGTGAAATCATGCTTGCTGTTTGGATGGGAACACAAGCTGatgagtcttttcctgaggcaTGGCATTCTGATGCTCATAATGTTAGTCACTCCAACCTCTCGAATACACGGTCAAAGGTGTATTTTACGCCTAAGCTTTATTATCTTAGAGTTGAAGTTATTGAAGCTCAAGATTTGGTTCCTCATGATAAAGGAAGAATTCCACAAGCTTCTGTTAGGGTTCAGCTAGGAAATCAGATGAGATTCACAAGGCCTTCTCAAATGAGAGGTATTAACCCTATTTGGAATGAGGAGCTTATGTTTGTGGCAGCTGAACCTTTTGAGGATATTATAGTTGTGACAGTTGAGGACAAATTTGGTCCTAACAATGTTGAAATCTTGGGAAGGGAGATTATGTCAGTCAGAAATGTTCCACAAAGGATGGAGACTGGAAAGCTACCGGATTCTCGTTGGTTCAATCTTCATAGGCCTAGTGCGGTCGGCGAGGAAGAAACAGAGAAAAAGAAGGAGAAATTTTCGAGTAAGGTTCATCTCCGAATTTGTCTTGAGGCGGGGTATCATGTTCTTGATGAGTCGACACATTTCAGCAGTGATCTTCAACCGTCTTCGAAACATTTGAGGAGGAAAAACATTGGATATCTCGAAGTCGGGATACTTAGTGCACGGAATTTGCTACCTATGAAGGGAAAAGATGGTAGGACTACTGATGCATACTGTGTAGCGAAGTATGGCAACAAATGGGTTAGAACAAGAACTTTGCTTGACACACTGTCACCTAGATGGAATGAGCAGTATACATGGGAGGTTCATGATCCATGCACTGTGATCACAGTTGGTGTTTTCGACAATCACCACCTCAATGGTAGCAGTGACCACAAAGATCAGAGGATTGGAAAGGTAAGAATAAGGTTGTCAACTCTTGAAACTGATAGGGTGTATACTCATTTTTATCCTCTATTGGTTCTACAACCTAATGGCCTGAAGAAGAATGGAGAGCTTCATTTGGCTGTGAGGTTTACTTGCACAGCTTGGGTTAATATGGTAGCTCAATATGGAAGACCTTTGCTTCCCAAAATGCATTATGTTCAACCAATAcctgttaggcacattgattgGCTCCGCTATCAGGCCATGCAGATTGTGGCAGCAAGGCTAGCAAGAGCTGAGCCGCCGCTTCGACGTGAATCAGTCGAGTACATGCTTGATGTGGATTACCATATGTGGAGTCTAAGGAGAAGCAAAGCAAACTTTCATCGCATAATGTCGCTACTCTCAGGTTTTACAGCTGTGTGTAAATGGCTTAATGACATTTGCACTTGGAGAAACCCAATTACAACTTGTCTTGTTCATGTCTTGTTAATCATACTTGTTTGCTACCCTGAGTTGATGTTGCCAACCATTTTTCTTTACTTATTTGTGATTGGTATTTGGAATTACCGGTTCCGACCAAGGAACCCACCTCACATGGATGCTAGGCTTTCACAGGCAGAAGTTTGTCATCCAGATGAATTGGATGAGGAATTTGACACTTTTCCAACTACAAGACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGAGAAGTGTAGCAGGTAGAGTACAAACCGTGGTTGGAGATTTAGCTACTCAAGGAGAAAGAGCTCAAGCTCTACTAAGTTGGAGAGACTCAAGAGCTACAGCTATTTTCATCATCTTCTCACTGATCTGGGCTGTATTCATTTACATTACACCATTCCAAGTAATAGCAATTATAGTTGGACTTTTCATGCTTCGCCATCCTCGGTTTCGAAGCAAGATGCCATCGGTACCAGTTAATTTCTTCAAGAGATTGCCTTCCAAGTCAGATGCAATGTTTTGA | 3123 | 0.3804 | MMNKLVVEVHDASDLMPKDGKGLANPYVQITFDEQEVKTQTKYKDINPYFNEKFVFNINTSRDLGHKTVEVCVYNHNEKKPSSKKNFLGRVRISGNSIPLSESESIIKRYPLEHSKGDIALKMIAFHDPFANTPPSPKPHPPQQHSQAKSSSFFEEHDEFDHDDEIPLQEINTNINMEDEENMFSDSEKKKKNKKKKEKEVRTFHSIGTEKPSHGHGHGHAHPPASAFPPVNHAPKFQSFVQPTVETQTRVDFAKSGPPNVMLMQIPKQNPEYALTETAPPLAARLRYKGGNKVSTTYDLVEQMHFLYVNVVKAKELPKMDISGSVDPYVEVKLGNYKGVTKHLEKNQHPVWKQIFAFSKDRLQSNLLEVTVKDKDLISKDDFVGRIMFDLNEVPVRVPPDSPLAPQWYRLEDKKGMKIEDGEIMLAVWMGTQADESFPEAWHSDAHNVSHSNLSNTRSKVYFTPKLYYLRVEVIEAQDLVPHDKGRIPQASVRVQLGNQMRFTRPSQMRGINPIWNEELMFVAAEPFEDIIVVTVEDKFGPNNVEILGREIMSVRNVPQRMETGKLPDSRWFNLHRPSAVGEEETEKKKEKFSSKVHLRICLEAGYHVLDESTHFSSDLQPSSKHLRRKNIGYLEVGILSARNLLPMKGKDGRTTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITVGVFDNHHLNGSSDHKDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRYQAMQIVAARLARAEPPLRRESVEYMLDVDYHMWSLRRSKANFHRIMSLLSGFTAVCKWLNDICTWRNPITTCLVHVLLIILVCYPELMLPTIFLYLFVIGIWNYRFRPRNPPHMDARLSQAEVCHPDELDEEFDTFPTTRPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQALLSWRDSRATAIFIIFSLIWAVFIYITPFQVIAIIVGLFMLRHPRFRSKMPSVPVNFFKRLPSKSDAMF | 1040 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu06g00856 | 1040 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 2 | 1039 | - | - | |
| Tsu06g00856 | 1040 | PANTHER | BNAA09G30540D PROTEIN | 2 | 1039 | - | - | |
| Tsu06g00856 | 1040 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 633 | 766 | IPR035892 | - | |
| Tsu06g00856 | 1040 | Pfam | Plant phosphoribosyltransferase C-terminal | 885 | 1040 | IPR013583 | - | |
| Tsu06g00856 | 1040 | Gene3D | C2 domain | 608 | 762 | IPR035892 | - | |
| Tsu06g00856 | 1040 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 117 | IPR035892 | - | |
| Tsu06g00856 | 1040 | CDD | C2C_MCTP_PRT_plant | 469 | 622 | - | - | |
| Tsu06g00856 | 1040 | CDD | C2D_MCTP_PRT_plant | 635 | 757 | - | - | |
| Tsu06g00856 | 1040 | ProSiteProfiles | C2 domain profile. | 448 | 573 | IPR000008 | - | |
| Tsu06g00856 | 1040 | MobiDBLite | consensus disorder prediction | 128 | 202 | - | - | |
| Tsu06g00856 | 1040 | Gene3D | C2 domain | 451 | 603 | IPR035892 | - | |
| Tsu06g00856 | 1040 | Gene3D | C2 domain | 292 | 430 | IPR035892 | - | |
| Tsu06g00856 | 1040 | Gene3D | C2 domain | 1 | 125 | IPR035892 | - | |
| Tsu06g00856 | 1040 | Pfam | C2 domain | 307 | 410 | IPR000008 | - | |
| Tsu06g00856 | 1040 | Pfam | C2 domain | 4 | 110 | IPR000008 | - | |
| Tsu06g00856 | 1040 | Pfam | C2 domain | 633 | 740 | IPR000008 | - | |
| Tsu06g00856 | 1040 | Pfam | C2 domain | 469 | 573 | IPR000008 | - | |
| Tsu06g00856 | 1040 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 468 | 624 | IPR035892 | - | |
| Tsu06g00856 | 1040 | CDD | C2B_MCTP_PRT_plant | 306 | 432 | - | - | |
| Tsu06g00856 | 1040 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 306 | 446 | IPR035892 | - | |
| Tsu06g00856 | 1040 | Coils | Coil | 177 | 197 | - | - | |
| Tsu06g00856 | 1040 | ProSiteProfiles | C2 domain profile. | 1 | 114 | IPR000008 | - | |
| Tsu06g00856 | 1040 | SMART | C2_3c | 4 | 112 | IPR000008 | - | |
| Tsu06g00856 | 1040 | SMART | C2_3c | 306 | 403 | IPR000008 | - | |
| Tsu06g00856 | 1040 | SMART | C2_3c | 469 | 567 | IPR000008 | - | |
| Tsu06g00856 | 1040 | SMART | C2_3c | 634 | 737 | IPR000008 | - | |
| Tsu06g00856 | 1040 | ProSiteProfiles | C2 domain profile. | 616 | 738 | IPR000008 | - | |
| Tsu06g00856 | 1040 | ProSiteProfiles | C2 domain profile. | 288 | 409 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu06g00856 | Tsu-Chr6 | 7662888 | 7666010 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu06g00856 | 2 | 1040 | Lipid Metabolism Gene Families | AT1G22610 | 68.803 | 0.0 | 1471 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu06g00856 | - | - | cam:101494825 | 1649.8 |